PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT07265
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family B3
Protein Properties Length: 629aa    MW: 71004.5 Da    PI: 8.5959
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT07265genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B341.91.7e-13921671798
               E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
               ++p + +++++   e + +++l +++g s ++ +  +k++++ v+t GW++Fv   +L+ gD+++Fk++++s+f   v +f+
  EMT07265  92 MIPEELVRRFKC--EIPGEIKLVTRKGYSHTIVV--SKNQEKLVFTVGWRQFVGNYDLQMGDSLIFKYNRNSQF--EVIIFD 167
               688888888864..46669***************..*********************************99999..777776 PP
2B3469.4e-151862621799
               E--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
        B3  17 vlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
               ++p +f+++++g+   +++++le+++  s+ + +   k++++ vlt GW +Fv+  gL+ gD++vF+++g+s+f   v +f+k
  EMT07265 186 IIPEEFVRRFKGE--FPREMILETKNRCSYIIGV--AKNKEKLVLTVGWGKFVETFGLEMGDTIVFRYNGNSQF--SVIIFDK 262
               69********988..7789***************..**********************************9999..8888875 PP
3B347.24e-15410494898
               -HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
        B3   8 sdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                +  ++  l+lp ++a+++ g++++   l   ++ g +Wev +    + g   + +GWk+F+++n+Lk gD+++F+l +++++++ v ++ 
  EMT07265 410 MNLDSRFVLTLPSQYAKKYLGEEPR---LY-LQLLGDKWEVGF--PDNTGDRRIVSGWKQFAQDNNLKMGDICLFELLSNQKRTMEVYIIP 494
               556677889**********666555...55.45789*******..44444445789*********************99999999999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019363.92E-1774167IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.101.0E-1576167IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086310.85676169IPR003340B3 DNA binding domain
SMARTSM010191.3E-680169IPR003340B3 DNA binding domain
PfamPF023623.9E-1192167IPR003340B3 DNA binding domain
CDDcd100171.05E-1292167No hitNo description
SMARTSM010196.6E-6178263IPR003340B3 DNA binding domain
PfamPF023622.8E-12186261IPR003340B3 DNA binding domain
CDDcd100173.41E-13186261No hitNo description
Gene3DG3DSA:2.40.330.104.5E-16186263IPR015300DNA-binding pseudobarrel domain
PROSITE profilePS5086311.519186263IPR003340B3 DNA binding domain
SuperFamilySSF1019367.06E-17186269IPR015300DNA-binding pseudobarrel domain
Gene3DG3DSA:2.40.330.106.9E-18394493IPR015300DNA-binding pseudobarrel domain
SuperFamilySSF1019369.02E-19398500IPR015300DNA-binding pseudobarrel domain
CDDcd100176.01E-17401494No hitNo description
PfamPF023622.3E-13403494IPR003340B3 DNA binding domain
PROSITE profilePS5086312.985403496IPR003340B3 DNA binding domain
SMARTSM010199.1E-13403496IPR003340B3 DNA binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 629 aa     Download sequence    Send to blast
MGEGDGDVLM HAGGQRGGHG GHAVSALHAL SMGSRKLSDT QENRPPAGWG AGKKMCTSCE  60
RCKVRDGYSY KHLDDAKKHF LVLMLGDFRD EMIPEELVRR FKCEIPGEIK LVTRKGYSHT  120
IVVSKNQEKL VFTVGWRQFV GNYDLQMGDS LIFKYNRNSQ FEVIIFDKLD REKALSVVQD  180
PFMPQIIPEE FVRRFKGEFP REMILETKNR CSYIIGVAKN KEKLVLTVGW GKFVETFGLE  240
MGDTIVFRYN GNSQFSVIIF DKLGCEKALS VVPDLFPPPV QERCTNATDT VKSSQPIQMQ  300
PFGESFLSED SHGACDVPDS NYFLRKKKAN LSSFLCEEES FSSEDGYGVR DACVKKKKAT  360
LSSSQKEQLK DGYITVHKAK LSPAQKEVVK QKVQSIHSEI PIFVAVMGKM NLDSRFVLTL  420
PSQYAKKYLG EEPRLYLQLL GDKWEVGFPD NTGDRRIVSG WKQFAQDNNL KMGDICLFEL  480
LSNQKRTMEV YIIPATDYNY SAGVQNDVDQ EALEGGSAPL QREALAHHAD GARDPDSRLL  540
RITNTDAWKM MLPLLVPDSP KEKPVVSEPS IPAVFALWGK QAFPSITRAR LRRKLKLFCY  600
LRSRSRLVMH ADWNSPSCSF SCFNPGSIM
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020186790.10.0putative B3 domain-containing protein Os08g0325100 isoform X1
RefseqXP_020186797.10.0putative B3 domain-containing protein Os03g0621600
TrEMBLM8B1380.0M8B138_AEGTA; B3 domain-containing protein
STRINGEMT072650.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP124821536
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G18990.18e-20B3 family protein