PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT07032 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | NAC | ||||||||
Protein Properties | Length: 349aa MW: 39048.9 Da PI: 8.0523 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 87.2 | 3.1e-27 | 10 | 95 | 1 | 84 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkklel..eevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWk 84 lppGfrF P+deelv++yL+ kv++++l+ + ++ evd++ +ePw+Lp +k +++ewyfFs rd+kyatg r+nrat+sgy k EMT07032 10 LPPGFRFYPSDEELVCHYLHGKVANQRLSGgaAGAMVEVDLHVHEPWELPDVAKLSTNEWYFFSFRDRKYATGLRTNRATRSGYSK 95 79*************************66511346***************87788999*************************966 PP | |||||||
2 | NAM | 97.9 | 1.5e-30 | 110 | 195 | 51 | 128 |
NAM 51 vkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk........kgelvglkktLvfykgrapkgektdWvmheyrl 128 +k +++ewyfFs rd+kyatg r++rat+sgyWkatgkd+ + s + + vg++ktLvfy+grapkg+kt Wvmhe+r+ EMT07032 110 AKLSTNEWYFFSFRDRKYATGLRTTRATRSGYWKATGKDRVIRSPrsssslsgRAAIVGMRKTLVFYRGRAPKGTKTCWVMHEFRI 195 344678*************************************99655555444444***************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.92E-29 | 7 | 93 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 50.366 | 10 | 214 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.8E-13 | 11 | 95 | IPR003441 | NAC domain |
Pfam | PF02365 | 6.1E-15 | 105 | 195 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 6.54E-37 | 108 | 214 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 349 aa Download sequence Send to blast |
MGLRDIEMTL PPGFRFYPSD EELVCHYLHG KVANQRLSGG AAGAMVEVDL HVHEPWELPD 60 VAKLSTNEWY FFSFRDRKYA TGLRTNRATR SGYSKAPLRI RLGDPNQHVA KLSTNEWYFF 120 SFRDRKYATG LRTTRATRSG YWKATGKDRV IRSPRSSSSL SGRAAIVGMR KTLVFYRGRA 180 PKGTKTCWVM HEFRIENPHS PPKEDWVLCR VFHKKKADTD YAMDGEPELG GGAVCGSNYL 240 SSSSCHDPEQ YHHSPMASFP SIGAGGDHYQ LLPCDHHHPH GAAGVSLNDV HPFDGMPQLL 300 SYDSILDFSQ QVQGGRSAAA CLRAGADDQC DGALMDLGLE EHYNYNSLM |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-38 | 1 | 217 | 4 | 168 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-38 | 1 | 217 | 4 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-38 | 1 | 217 | 4 | 168 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-38 | 1 | 217 | 4 | 168 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-38 | 1 | 217 | 7 | 171 | NAC domain-containing protein 19 |
3swm_B | 2e-38 | 1 | 217 | 7 | 171 | NAC domain-containing protein 19 |
3swm_C | 2e-38 | 1 | 217 | 7 | 171 | NAC domain-containing protein 19 |
3swm_D | 2e-38 | 1 | 217 | 7 | 171 | NAC domain-containing protein 19 |
3swp_A | 2e-38 | 1 | 217 | 7 | 171 | NAC domain-containing protein 19 |
3swp_B | 2e-38 | 1 | 217 | 7 | 171 | NAC domain-containing protein 19 |
3swp_C | 2e-38 | 1 | 217 | 7 | 171 | NAC domain-containing protein 19 |
3swp_D | 2e-38 | 1 | 217 | 7 | 171 | NAC domain-containing protein 19 |
4dul_A | 2e-38 | 1 | 217 | 4 | 168 | NAC domain-containing protein 19 |
4dul_B | 2e-38 | 1 | 217 | 4 | 168 | NAC domain-containing protein 19 |
Search in ModeBase |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK364002 | 0.0 | AK364002.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2020L05. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020173046.1 | 0.0 | NAC domain-containing protein 92-like | ||||
TrEMBL | M8BVS2 | 0.0 | M8BVS2_AEGTA; Protein CUP-SHAPED COTYLEDON 3 | ||||
STRING | EMT07032 | 0.0 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP697 | 38 | 166 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G28530.1 | 2e-62 | NAC domain containing protein 74 |