PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT04981

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

bZIP

Protein Properties

Length: 501aa MW: 54775.9 Da PI: 7.2747

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT04981	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.6	3.6e-10	199	240	3	41
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH...HHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLee...kvkeLeae 41 + k+ rr+++NReAAr+sR+RKka+i++Le k ++Le+e EMT04981 199 KEKVMRRLAQNREAARKSRLRKKAYIQQLESsriKLAQLEQE 240 56899************************9722244444444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.8E-8	195	244	No hit	No description
SMART	SM00338	0.002	197	250	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.22	199	243	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	4.5E-7	200	240	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	2.81E-7	201	245	No hit	No description
PROSITE pattern	PS00036	0	204	219	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	1.7E-24	302	379	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0009409	Biological Process	response to cold
GO:0042742	Biological Process	defense response to bacterium
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 501 aa Download sequence Send to blast
MVRGALGEER RGERVVPSRV ITNRTQPQLG YVKAEVMEAT PAALLLALDP KAASSEQSRA 60 RTKGYGWCAF PRRDVNGDER TGPVAVAVAA LGTGTGGASP PEYMTSAAAA QYAPAPLRMA 120 MYERAPPQQH QQQQQPQLQP ALGMWSSEPY KVDSGGQATS GSSIMEPDAK FDHAGLDEDP 180 QMDELETAGD ADQGASKPKE KVMRRLAQNR EAARKSRLRK KAYIQQLESS RIKLAQLEQE 240 LQRTRQQQGV YGGSNPGTSL QRHHGGGSAG HFGFAAAGQM MDPGVAAFEI DYGRWVDEQK 300 RHTEELRNAL QPGQATSELE LEVMVQTGLA NYDNLFQIKG AAAQADVFCV MSGLWRFPAE 360 RFFLWIGGFR PSEVLKILSP QLEPMTDPQS VAVYALQLTS AQAEDALSQG MQKLQQTLAE 420 SLTDPFAAPD AYMVGAVEKL KGLVGFVQQA DHLRLETLQN MHRILTTRQA AKGLLVLGDY 480 FQRLRALSTL WAARPRESAI S

Sequence ? help Back to Top

Protein Sequence Length: 501 aa Download sequence Send to blast

MVRGALGEER RGERVVPSRV ITNRTQPQLG YVKAEVMEAT PAALLLALDP KAASSEQSRA  60
RTKGYGWCAF PRRDVNGDER TGPVAVAVAA LGTGTGGASP PEYMTSAAAA QYAPAPLRMA  120
MYERAPPQQH QQQQQPQLQP ALGMWSSEPY KVDSGGQATS GSSIMEPDAK FDHAGLDEDP  180
QMDELETAGD ADQGASKPKE KVMRRLAQNR EAARKSRLRK KAYIQQLESS RIKLAQLEQE  240
LQRTRQQQGV YGGSNPGTSL QRHHGGGSAG HFGFAAAGQM MDPGVAAFEI DYGRWVDEQK  300
RHTEELRNAL QPGQATSELE LEVMVQTGLA NYDNLFQIKG AAAQADVFCV MSGLWRFPAE  360
RFFLWIGGFR PSEVLKILSP QLEPMTDPQS VAVYALQLTS AQAEDALSQG MQKLQQTLAE  420
SLTDPFAAPD AYMVGAVEKL KGLVGFVQQA DHLRLETLQN MHRILTTRQA AKGLLVLGDY  480
FQRLRALSTL WAARPRESAI S

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional regulator involved in defense response. {ECO:0000250\|UniProtKB:Q7X993}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00502	DAP	Transfer from AT5G10030	Download

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	KJ596414	0.0	KJ596414.1 Triticum aestivum transcription factor TGA4 (TGA4) mRNA, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020166032.1	0.0	transcription factor TGAL6-like isoform X1
Refseq	XP_020166033.1	0.0	transcription factor TGAL6-like isoform X1
Swissprot	A0A0P0WFC8	1e-157	TGAL6_ORYSJ; Transcription factor TGAL6
TrEMBL	M8AKF7	0.0	M8AKF7_AEGTA; Transcription factor TGA4
STRING	EMT04981	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3571	38	77

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G10030.2	1e-105	TGACG motif-binding factor 4

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Okada A, et al. OsTGAP1, a bZIP transcription factor, coordinately regulates the inductive production of diterpenoid phytoalexins in rice. J. Biol. Chem., 2009. 284(39): p. 26510-8 [PMID:19635799] Okada K The biosynthesis of isoprenoids and the mechanisms regulating it in plants. Biosci. Biotechnol. Biochem., 2011. 75(7): p. 1219-25 [PMID:21737944] Yamane H Biosynthesis of phytoalexins and regulatory mechanisms of it in rice. Biosci. Biotechnol. Biochem., 2013. 77(6): p. 1141-8 [PMID:23748776] Miyamoto K, et al. Identification of target genes of the bZIP transcription factor OsTGAP1, whose overexpression causes elicitor-induced hyperaccumulation of diterpenoid phytoalexins in rice cells. PLoS ONE, 2014. 9(8): p. e105823 [PMID:25157897] Miyamoto K, et al. Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]