PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT03623 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | ARR-B | ||||||||
Protein Properties | Length: 218aa MW: 24223.4 Da PI: 8.2251 | ||||||||
Description | ARR-B family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 21.1 | 7.1e-07 | 192 | 212 | 1 | 21 |
G2-like 1 kprlrWtpeLHerFveaveqL 21 k++++Wt e+He Fv+av+qL EMT03623 192 KKKVEWTREMHELFVNAVTQL 212 6899****************9 PP | |||||||
2 | Response_reg | 43.1 | 2.2e-15 | 21 | 129 | 1 | 108 |
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTT..SEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempg..mdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl vdD+p+ + l+q+l++ gy ev++ ++ ea++ ++++ D i++ ++ g mdGl llk++ ++ + ++v+++ +++e++ + + G EMT03623 21 VLAVDDDPIYLYSLTQMLRRCGY-EVTAKPSPAEAVREVEKNPdgTDFIMTVVQTRGrgMDGLGLLKRLGKRY--PVVLVFSGDESMETRRRGNEGG 114 799********************.77777777777777766666999999999998888**********7766..6899999*************** PP ESEEEESS--HHHHH CS Response_reg 94 akdflsKpfdpeelv 108 a l+Kp ++++ EMT03623 115 ACYLLEKPLRDAQIH 129 *********999985 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.40.50.2300 | 3.3E-22 | 17 | 150 | No hit | No description |
SuperFamily | SSF52172 | 2.7E-20 | 17 | 143 | IPR011006 | CheY-like superfamily |
SMART | SM00448 | 1.2E-12 | 19 | 132 | IPR001789 | Signal transduction response regulator, receiver domain |
PROSITE profile | PS50110 | 27.606 | 20 | 136 | IPR001789 | Signal transduction response regulator, receiver domain |
Pfam | PF00072 | 1.9E-11 | 21 | 129 | IPR001789 | Signal transduction response regulator, receiver domain |
CDD | cd00156 | 1.89E-13 | 22 | 128 | No hit | No description |
Gene3D | G3DSA:1.10.10.60 | 6.9E-6 | 190 | 214 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0005622 | Cellular Component | intracellular | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 218 aa Download sequence Send to blast |
MANGDQDMAT DELMETEGLK VLAVDDDPIY LYSLTQMLRR CGYEVTAKPS PAEAVREVEK 60 NPDGTDFIMT VVQTRGRGMD GLGLLKRLGK RYPVVLVFSG DESMETRRRG NEGGACYLLE 120 KPLRDAQIHF IWQHVVRWRR NAAAAATANA DPRHSQGIHL DDTPRKRGQG VNDPNKGKGG 180 SEGGLQLGTT KKKKVEWTRE MHELFVNAVT QLKTTEGA |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020163012.1 | 1e-130 | two-component response regulator ORR21-like | ||||
TrEMBL | R7W1I1 | 1e-161 | R7W1I1_AEGTA; Two-component response regulator ARR12 | ||||
STRING | EMT03623 | 1e-162 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP19506 | 2 | 3 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G67710.1 | 3e-17 | response regulator 11 |