PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT03622 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | G2-like | ||||||||
Protein Properties | Length: 186aa MW: 20452.3 Da PI: 5.4812 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 25.1 | 3.8e-08 | 4 | 33 | 28 | 55 |
G2-like 28 tPktilelmkvkgL..tlehvkSHLQkYRl 55 tP +i+e+++++g+ t ++v SHLQkYR EMT03622 4 TPNNIREFLEIDGIyvTTAQVSSHLQKYRK 33 9************65599***********5 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 3.1E-5 | 4 | 34 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
MDDTPNNIRE FLEIDGIYVT TAQVSSHLQK YRKDCRTGGL SIMPSSMPSH SNSTSKNNLE 60 SQESGGSYRF HMRSQEARDI NQTSWLSGGA SQVDYGVLGN GNQTTNLGSG AAYGHGYHHG 120 NGIGDINGYD HHYGTVSAND YVKGEIDCTK SCCISEIGVK SKPEDGDLVT NMEAYWMQPA 180 RDYYQF |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK376525 | 1e-150 | AK376525.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3126L22. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020201079.1 | 7e-81 | hornerin-like | ||||
TrEMBL | R7W5C5 | 1e-137 | R7W5C5_AEGTA; Uncharacterized protein | ||||
STRING | EMT03622 | 1e-138 | (Aegilops tauschii) |