PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | EMT03125 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
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Family | bZIP | ||||||||
Protein Properties | Length: 167aa MW: 18699.4 Da PI: 7.2635 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 36.9 | 7.9e-12 | 24 | 83 | 4 | 63 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 + +rk +NR++A+rsR +++++ ++L+ +v++L+ N+a++ + +++++ +++++ EMT03125 24 ERQRKRKTSNRLSAQRSRVKRQQREDNLAARVAQLSIDNEAMRVTTGLVQQQCSLVEQQN 83 4567999**********************************************9888877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.6E-11 | 21 | 82 | No hit | No description |
SMART | SM00338 | 4.8E-11 | 21 | 85 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 5.6E-9 | 23 | 83 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.059 | 23 | 86 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.95E-8 | 25 | 80 | No hit | No description |
CDD | cd14702 | 1.65E-12 | 26 | 77 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 28 | 43 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 167 aa Download sequence Send to blast |
MEMIPPAAAA AAPPRRGGAV TEEERQRKRK TSNRLSAQRS RVKRQQREDN LAARVAQLSI 60 DNEAMRVTTG LVQQQCSLVE QQNRVLFADA RCLYSLLQQQ NSQLRLLGQI TGVPMDVQEI 120 PVHLTQLYGG LQTPPAPPLS FPPEIQMMFQ PEQLDDIMDD AGSLPWL |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 25 | 30 | QRKRKT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AK250808 | 1e-133 | AK250808.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf88n03, mRNA sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020164955.1 | 1e-118 | ocs element-binding factor 1-like | ||||
TrEMBL | A0A3B6JKQ8 | 1e-117 | A0A3B6JKQ8_WHEAT; Uncharacterized protein | ||||
TrEMBL | A0A453I8V0 | 1e-117 | A0A453I8V0_AEGTS; Uncharacterized protein | ||||
TrEMBL | R7W1G6 | 1e-117 | R7W1G6_AEGTA; Ocs element-binding factor 1 | ||||
STRING | EMT03125 | 1e-118 | (Aegilops tauschii) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP12504 | 28 | 37 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G18160.1 | 9e-10 | basic leucine-zipper 2 |