PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT03076

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

bZIP

Protein Properties

Length: 332aa MW: 35297.9 Da PI: 6.5903

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT03076	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42.2	1.7e-13	274	324	5	55
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55 +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+ N++L + +e+ ++ EMT03076 274 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKDLNEELVRKQKEILEM 324 79************************************9887666655444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	2.6E-10	270	328	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	10.588	272	332	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.6E-13	274	321	No hit	No description
SuperFamily	SSF57959	5.84E-10	274	321	No hit	No description
CDD	cd14707	1.21E-24	274	326	No hit	No description
Pfam	PF00170	2.0E-11	274	323	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	277	292	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0009737	Biological Process	response to abscisic acid
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding
GO:0044212	Molecular Function	transcription regulatory region DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 332 aa Download sequence Send to blast
MDFRSSNGGS SSERAPAEGA PLARQGSIYS LTFEEFQSTL GGGAGMGGSD LGKDFSSMNM 60 DELLRSIWTA EESQAMAASA SGAGAGPPPT SLQGQGSLTL PRTLSAKTVD EVWRNLVRDD 120 PLPVGPEGAE PQPHRRATLG EMTLEEFLVK AGVVREIPTA PAVPPPPMHP RPVPVVPKGP 180 SFYGNFPSAN DAGAAALGFP PGAMGDLALA NGLMPRAVGM GGAPLVVQTA VNPVDSGSKG 240 SEDLSSPSEP MPYSFEGIVR GRRTGGGVEK VVERRQRRMI KNRESAARSR ARKQAYTMEL 300 EAEVQKLKDL NEELVRKQKE ILEMQKRETS RY

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269\|PubMed:10611387}.

Binding Motif ? help Back to Top
Motif ID	Method	Source	Motif file
MP00087	SELEX	Transfer from AT1G49720	Download

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: By abscisic acid (ABA). {ECO:0000269\|PubMed:10611387}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	Retrieve

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AB362820	0.0	AB362820.1 Triticum aestivum Wabi5-3 mRNA for basic region leucine zipper protein, complete cds.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020177660.1	0.0	bZIP transcription factor TRAB1-like isoform X1
Refseq	XP_020177661.1	0.0	bZIP transcription factor TRAB1-like isoform X2
Swissprot	Q6ZDF3	9e-98	TRAB1_ORYSJ; bZIP transcription factor TRAB1
TrEMBL	N1QSK8	0.0	N1QSK8_AEGTA; BZIP transcription factor TRAB1
STRING	EMT03076	0.0	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP706	38	147

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G19290.3	2e-30	ABRE binding factor 4

Publications ? help Back to Top
Kagaya Y,Hobo T,Murata M,Ban A,Hattori T Abscisic acid-induced transcription is mediated by phosphorylation of an abscisic acid response element binding factor, TRAB1. Plant Cell, 2002. 14(12): p. 3177-89 [PMID:12468735] Kobayashi Y, et al. Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors. Plant J., 2005. 44(6): p. 939-49 [PMID:16359387] Kobayashi F,Maeta E,Terashima A,Takumi S Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings. Physiol Plant, 2008. 134(1): p. 74-86 [PMID:18433415]