PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT01724
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family G2-like
Protein Properties Length: 569aa    MW: 63404.8 Da    PI: 4.6441
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT01724genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like50.64.1e-16149201355
   G2-like   3 rlrWtpeLHerFveaveqLGGsekAtPktilelmkvkg..LtlehvkSHLQkYRl 55 
               r  W++eLHe+F++ave + G   At ++i + m+ k+  Lt++h++SHLQk+Rl
  EMT01724 149 RFIWSSELHEKFLQAVEVI-GVS-ATARKIHQNMNAKDlnLTIQHIASHLQKHRL 201
               789****************.665.9***********973369************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466892.69E-10148203IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.607.8E-16148203IPR009057Homeodomain-like
TIGRFAMsTIGR015575.5E-15149202IPR006447Myb domain, plants
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 569 aa     Download sequence    Send to blast
MAVNLSSVSC IDRTTIIYVE HFRRFLPFQT GEEALDSLKK GFAKDEELDL IVAEVHPGNT  60
EVGTLRLFHH ILNELEVPLI TMCAYDEAAS ARMTLGTCFN VVKPLDTETV NFLKMRALQH  120
RSIKNHRSET EDEEQDALNV NVYSDNLGRF IWSSELHEKF LQAVEVIGVS ATARKIHQNM  180
NAKDLNLTIQ HIASHLQKHR LRAPKLSHNE EVYQHYASMK ELSEMIASAY KVASAKPNNH  240
PATTQTQFTH GVASAIWDKY PGMVWPHVEG SSASSAMCYN YPGKPWGQVG ESSAGARVSQ  300
TNARPPPVLI HGTKSIWDRY EESLSYKREV LPIRSKALDG YGRNISVSLE REISRTESAG  360
KIVINLESDE MQKDTTDDVH AAVTLQEDTM DEVHAAVTLQ KDTMNEVYAA VTLQKDTMDE  420
AHAAVTPHEV NEVPAANMGA GYLVDLAGNY HPAVENAQSK PFSDLDWEEM EKFWANQMEG  480
QQEQQGLDLV DLLQVDGISP EELLQEDEAW NQALQPANPA NVVNNAPMAE EPGAGDAPVY  540
DPANQSGVAE NVFWVWSPQF AGDYYGMPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020157230.10.0uncharacterized protein LOC109742549 isoform X1
RefseqXP_020157231.10.0uncharacterized protein LOC109742549 isoform X1
RefseqXP_020157232.10.0uncharacterized protein LOC109742549 isoform X1
RefseqXP_020157233.10.0uncharacterized protein LOC109742549 isoform X1
RefseqXP_020157234.10.0uncharacterized protein LOC109742549 isoform X2
TrEMBLR7VZG10.0R7VZG1_AEGTA; Two-component response regulator ARR1
STRINGEMT017240.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP130171928
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G16110.11e-10response regulator 2