PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT01601
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family GRF
Protein Properties Length: 322aa    MW: 35539.4 Da    PI: 8.6767
Description GRF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT01601genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRC763.9e-2492136145
       WRC   1 daepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45 
               d+epgrCrRtDGKkWRCsr++++ +k+C+rH+hrg++rsrk++e+
  EMT01601  92 DPEPGRCRRTDGKKWRCSREAYGESKYCDRHMHRGKNRSRKPVEP 136
               79****************************************985 PP
2QLQ55.61.6e-191549236
       QLQ  2 aFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
               FTa+Q+ +L++Q+l+yKy+aa+ +vP+eL+++++
  EMT01601 15 LFTASQWRELEHQALIYKYMAAGSQVPHELVLPLR 49
              5********************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM009518.0E-81450IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166620.5591550IPR014978Glutamine-Leucine-Glutamine, QLQ
PfamPF088801.6E-131648IPR014978Glutamine-Leucine-Glutamine, QLQ
PROSITE profilePS5166724.07492136IPR014977WRC domain
PfamPF088792.4E-1993135IPR014977WRC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005524Molecular FunctionATP binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MMLGGHGGGG GGRCLFTASQ WRELEHQALI YKYMAAGSQV PHELVLPLRH RDAAAFAAID  60
TVPSLACYPP PQPSLGWGLY GAGAQYARKP EDPEPGRCRR TDGKKWRCSR EAYGESKYCD  120
RHMHRGKNRS RKPVEPMSSS SVSSPAASYR QTALSMSPPT PADTPTYGHG HGHDHLRAAA  180
GQSQSQINPL QLHLDTPSPP PSYHRYAPAQ QYGGSFFQNR QQVQEEAEAE ARRRQHFLAL  240
GADLSLDKPD ATTAASSTTE EKPLRRFFDE WPRDGNAVEG RPWNMGHRDE TLLSMSIPTT  300
TATHPDLAAA SRYHHHHNGT YG
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that plays a regulatory role in gibberellin-induced stem elongation. {ECO:0000250}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankCT8361982e-96CT836198.1 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCEA059E01, full insert sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020146986.10.0growth-regulating factor 2-like isoform X2
SwissprotQ6AWY73e-90GRF2_ORYSJ; Growth-regulating factor 2
TrEMBLA0A286Q1U60.0A0A286Q1U6_WHEAT; Growth regulating factor 2-D1
TrEMBLN1QU070.0N1QU07_AEGTA; Uncharacterized protein
STRINGEMT016010.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP139922527
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13960.11e-40growth-regulating factor 5