PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT00895
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family HB-other
Protein Properties Length: 350aa    MW: 37330.2 Da    PI: 5.0175
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT00895genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox24.64.2e-082402722254
               SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS
  Homeobox  22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 
                ryp+ +e+  LA++ gL+  qV++WF N R +
  EMT00895 240 RRYPKDSEKVMLARQAGLSRGQVSNWFINARVR 272
               79*****************************88 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM005746.7E-5152279IPR006563POX domain
PfamPF075262.5E-18158243IPR006563POX domain
SMARTSM003893.0E-4217280IPR001356Homeobox domain
PROSITE profilePS5007110.56226276IPR001356Homeobox domain
Gene3DG3DSA:1.10.10.602.6E-16230282IPR009057Homeodomain-like
PfamPF059202.7E-11238272IPR008422Homeobox KN domain
SuperFamilySSF466892.65E-11240283IPR009057Homeodomain-like
CDDcd000864.80E-8241277No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    Send to blast
MATFFSTSND QRGLAGGGGG GGDMSFHHHY PMSNQYPDSS TGGLIPLPAS ILQQSHIAHG  60
GGGDGRDDEP AAFMNSRDSA ELGGLQTQML MGDGGASAGQ RTHQGGLSLS LGSQVPVSLY  120
QYGRPGGMAA AASPTLMSPN QSAMAMAASR NAQVNVYVQN SRFLKAAREL LDEVVSVRDA  180
IKRKGDRKDD SAGNGECGKV EGDKGEENEG SSAAELSPAE RQDLQNKVTA LMAMLDQVDR  240
RYPKDSEKVM LARQAGLSRG QVSNWFINAR VRLWKPMVEE MYKEEFGAEM DSTNSSSENA  300
GNKHGKVDEA ACSEDQDRDE FQSTSTHAGA SLLLNAYKSE PSISIEELKK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3675790.0AK367579.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2059B17.
GenBankAK3692490.0AK369249.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2087L16.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020165933.11e-154BEL1-like homeodomain protein 7
TrEMBLR7VZK80.0R7VZK8_AEGTA; BEL1-like homeodomain protein 6
STRINGEMT008950.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP90138131
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34610.22e-26BEL1-like homeodomain 6