PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

EMT00528

Organism

Aegilops tauschii

Taxonomic ID

37682

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops

Family

bZIP

Protein Properties

Length: 97aa MW: 11142.8 Da PI: 10.7879

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
EMT00528	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	53.2	6.5e-17	12	65	3	56
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 e+ r++r+++NRe+A rsR+RK+a++eeLe++v L N +Lkk+ +e++ + EMT00528 12 EDPRTIRMMRNRESALRSRARKRAYVEELEKEVRRLVDDNLKLKKQCKEINLSC 65 6789************************************99999999887655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	9.4E-11	10	74	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	5.5E-15	11	62	No hit	No description
PROSITE profile	PS50217	10.151	12	62	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.06E-12	15	62	No hit	No description
Pfam	PF00170	4.7E-13	15	62	IPR004827	Basic-leucine zipper domain
CDD	cd14707	1.72E-14	18	65	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 97 aa Download sequence Send to blast
MELRQGGGSS GEDPRTIRMM RNRESALRSR ARKRAYVEEL EKEVRRLVDD NLKLKKQCKE 60 INLSCHFSLV LCWDKVSSVS KTATTISTRG NAQMVRT

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	AK249012	2e-56	AK249012.1 Hordeum vulgare subsp. vulgare cDNA clone: FLbaf15j05, mRNA sequence.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020177215.1	4e-35	protein FD-like
TrEMBL	N1QP79	3e-64	N1QP79_AEGTA; BZIP transcription factor TRAB1
STRING	EMT00528	4e-65	(Aegilops tauschii)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4017	30	72