PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID EMT00070
Organism
Aegilops tauschii
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Aegilops
Family HB-other
Protein Properties Length: 275aa    MW: 31089.5 Da    PI: 8.6289
Description HB-other family protein
Gene Model
Gene Model ID Type Source Coding Sequence
EMT00070genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox23.31.1e-071554645
              S--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHH CS
  Homeobox  6 tftkeqleeLeelFeknrypsaeereeLAkklgLterqVk 45
              + ++ q++ Le+++ + +yp+ e+ +e A+++gLt +qVk
  EMT00070 15 KKSPLQIQMLESFYSEVQYPNPEDVTEYAASVGLTYNQVK 54
              66899**********************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.84E-6954IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.5E-61454IPR009057Homeodomain-like
CDDcd000864.25E-61454No hitNo description
PfamPF000464.1E-51554IPR001356Homeobox domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MAKGFLAKSD NAGTKKSPLQ IQMLESFYSE VQYPNPEDVT EYAASVGLTY NQVKPCKRPD  60
LKLNQPHSSV NNSGNCLIFC LMWLIPSQYH VELIADTTGH QSYQDQSVLK KRKIMSPTAQ  120
RSTLPFENND PVRKHGKGKE IQDCSSFIDE SGCLRSLRPF EDCGGKLAQR QTLPRKKVNK  180
KSRPPPSKRK VPCGRVTDLT EHPSVECHLS VDESESSELR TEQATLVDDE ELELNLLARF  240
PPPSVRMKQP FPTKPWESSP EMVKKLFQVK CNTLL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3739811e-130AK373981.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv3049P02.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020187489.11e-141homeobox-DDT domain protein RLT3-like
TrEMBLR7VYW00.0R7VYW0_AEGTA; Uncharacterized protein
STRINGEMT000700.0(Aegilops tauschii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP45563350
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G12750.12e-07Homeodomain-like transcriptional regulator