PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_011401513.1

Organism

Auxenochlorella protothecoides

Taxonomic ID

3075

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella

Family

bZIP

Protein Properties

Length: 455aa MW: 47348.6 Da PI: 6.3587

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_011401513.1	genome	BGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.9	4.5e-08	112	161	5	54
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 k + +kNR A+rr+R+R k++++eLee v++L+ + ++ e l XP_011401513.1 112 KQTALQEKNRRAQRRFRERQKMKVAELEEQVATLTLQLDRVTGERAALAS 161 5666789***************************8665554444444444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	0.0058	107	172	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	1.1E-6	114	168	No hit	No description
SuperFamily	SSF57959	2.01E-6	117	167	No hit	No description
Pfam	PF07716	1.6E-4	118	151	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 455 aa Download sequence Send to blast
MNQDFVEGGA PPPLAPDPLE LTGMAWDLDV EAFLDDYLKD VDAGPPDPFG TYPASLPIPT 60 QEPGVKSEAD PSSSEGLSDR LAKQTLDPQS GADCRGTPSP PPRAGKAQGV RKQTALQEKN 120 RRAQRRFRER QKMKVAELEE QVATLTLQLD RVTGERAALA SHASRLEAAL AAATAREEAA 180 AGDLRLTLRE GQSQSLTAEE LRGMTPAELA RYYKAYVNEL AQSLRASLAG LRALFQGKLA 240 GIRARRRGVV EALARAEPVG TGTRPLAALY LASHEAARGL REALREEHIL VLDFESTVFK 300 HVLSGLQVAQ LMIHSFPWTP DCLALCTWVA AEAGDADALG ALAAEAQRKA AAAAPHPGGG 360 VGPAGPFASP FLADSGVNAG ALAAQQHALA PLALAPRSAS GLSLPSPPHS MPGPGSSGTQ 420 HNGLCGPGMP FVSIGFGGMG SGGPAPGMLP VHTAS

Sequence ? help Back to Top

Protein Sequence Length: 455 aa Download sequence Send to blast

MNQDFVEGGA PPPLAPDPLE LTGMAWDLDV EAFLDDYLKD VDAGPPDPFG TYPASLPIPT  60
QEPGVKSEAD PSSSEGLSDR LAKQTLDPQS GADCRGTPSP PPRAGKAQGV RKQTALQEKN  120
RRAQRRFRER QKMKVAELEE QVATLTLQLD RVTGERAALA SHASRLEAAL AAATAREEAA  180
AGDLRLTLRE GQSQSLTAEE LRGMTPAELA RYYKAYVNEL AQSLRASLAG LRALFQGKLA  240
GIRARRRGVV EALARAEPVG TGTRPLAALY LASHEAARGL REALREEHIL VLDFESTVFK  300
HVLSGLQVAQ LMIHSFPWTP DCLALCTWVA AEAGDADALG ALAAEAQRKA AAAAPHPGGG  360
VGPAGPFASP FLADSGVNAG ALAAQQHALA PLALAPRSAS GLSLPSPPHS MPGPGSSGTQ  420
HNGLCGPGMP FVSIGFGGMG SGGPAPGMLP VHTAS

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_011401513.1	0.0	hypothetical protein F751_5721
TrEMBL	A0A087SRZ0	0.0	A0A087SRZ0_AUXPR; Uncharacterized protein
STRING	A0A087SRZ0	0.0	(Auxenochlorella protothecoides)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Chlorophytae	OGCP3867	4	4

Link Out ? help Back to Top
Entrez Gene	23617112