PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011397631.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella
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Family | Nin-like | ||||||||
Protein Properties | Length: 142aa MW: 15733.9 Da PI: 7.8152 | ||||||||
Description | Nin-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | RWP-RK | 77.2 | 1.9e-24 | 50 | 94 | 8 | 52 |
RWP-RK 8 edlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 +++yF pi dAA+ +++c+TvLK+iCR++GI+RWP+Rk+ks+ XP_011397631.1 50 RSIAQYFRYPISDAAQMMDICPTVLKKICRRHGINRWPQRKLKSI 94 6799***************************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51519 | 16.222 | 27 | 114 | IPR003035 | RWP-RK domain |
Pfam | PF02042 | 2.7E-21 | 51 | 94 | IPR003035 | RWP-RK domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 142 aa Download sequence Send to blast |
MPSTCERENG SFLSDVSPFD ASPSDDSAAG FLPADMSGRL DHKKGCTDIR SIAQYFRYPI 60 SDAAQMMDIC PTVLKKICRR HGINRWPQRK LKSIEKRVQE LAARAPEAGA DRASLQAKIA 120 ELQEEMHALT CGQLSLPSHC AW |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011397631.1 | 1e-103 | Protein NLP9 | ||||
TrEMBL | A0A087SG89 | 1e-101 | A0A087SG89_AUXPR; Protein NLP9 | ||||
TrEMBL | A0A1D2A8H3 | 1e-101 | A0A1D2A8H3_AUXPR; Uncharacterized protein (Fragment) | ||||
STRING | A0A087SG89 | 1e-102 | (Auxenochlorella protothecoides) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Chlorophytae | OGCP84 | 16 | 50 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G59580.2 | 4e-15 | Nin-like family protein |
Link Out ? help Back to Top | |
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Entrez Gene | 23615146 |