PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011396441.1
Organism
Auxenochlorella protothecoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella
Family bZIP
Protein Properties Length: 292aa    MW: 30438.2 Da    PI: 9.68
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011396441.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_142.51.4e-13241284649
                     HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
          bZIP_1   6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                       +r++kNRe+A rsR+R++++++ Le kv+eL++ N+ L++++
  XP_011396441.1 241 SSKRAIKNRESAARSRARRQEYTQTLEAKVAELQEANRLLREQV 284
                     579**********************************9999865 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0045236290IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.944238284IPR004827Basic-leucine zipper domain
PfamPF001708.9E-11240284IPR004827Basic-leucine zipper domain
CDDcd147071.40E-17240284No hitNo description
SuperFamilySSF579593.44E-9241286No hitNo description
Gene3DG3DSA:1.20.5.1706.1E-11242285No hitNo description
PROSITE patternPS000360243258IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    Send to blast
MQRDAWTDPI SASLETLPGG ESLPADLGKL LQQLVQASAA EGAGTDSNAA DELRDSLSSL  60
GISIEALQRH NPGSFGSKTL DDVWEMMAPQ RLDGDTSDAR LSQVGAALAI GDRKLLDQAA  120
QLLPELSSLV PSTLPTPASL QMPSHLPPHA GEATPHNPAA AAGVRAGLPS RAASPSLAGF  180
RYRGVSLGPP GGPGSLTPPA HSLGLEVRPG AHPVNASPFQ LSSAPGPRAA SPLSRPEGAR  240
SSKRAIKNRE SAARSRARRQ EYTQTLEAKV AELQEANRLL REQVGVKRAR SL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011396441.10.0Protein FD
TrEMBLA0A087SCW30.0A0A087SCW3_AUXPR; Protein FD
STRINGA0A087SCW30.0(Auxenochlorella protothecoides)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP939144