PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_011395984.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella
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Family | G2-like | ||||||||
Protein Properties | Length: 252aa MW: 27253.9 Da PI: 6.4268 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 44.5 | 3.4e-14 | 78 | 132 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvk..gLtlehvkSHLQkYRl 55 ++++Wt eLH F +v++L ++ +P +ile m+ gLt+++++SHLQk+R XP_011395984.1 78 AKVEWTRELHMVFAGVVRSL-PVDQQVPTKILEGMGQWgwGLTRANIASHLQKFRH 132 689*****************.99************985337**************6 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.10.10.60 | 2.9E-14 | 75 | 133 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 1.79E-9 | 76 | 135 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.5E-13 | 78 | 134 | IPR006447 | Myb domain, plants |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 252 aa Download sequence Send to blast |
MDPGVWHCGE LCSGLSSPSS AVQRSEYSFD SLGTPSLQAE MHCVEPCAPA LNMLLIHDHP 60 GPHSGKEEEE ANPNAKRAKV EWTRELHMVF AGVVRSLPVD QQVPTKILEG MGQWGWGLTR 120 ANIASHLQKF RHRQGRVPGK ERECGALVSS CSTPHLDAEG WAYHDAGSAG TSPYMMMPTT 180 PPSMAPSLAF QSEGSLTDME WELGQTGDAC PPSLSRQLAQ CVQERPAALP IGLTLDHGAV 240 LRALRRRGSL VA |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_011395984.1 | 0.0 | Two-component response regulator ARR1 | ||||
TrEMBL | A0A087SBL0 | 0.0 | A0A087SBL0_AUXPR; Two-component response regulator ARR1 | ||||
STRING | A0A087SBL0 | 0.0 | (Auxenochlorella protothecoides) |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G16857.2 | 3e-14 | response regulator 1 |
Link Out ? help Back to Top | |
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Entrez Gene | 23614696 |