PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_011395797.1
Organism
Auxenochlorella protothecoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; Trebouxiophyceae; Chlorellales; Chlorellaceae; Auxenochlorella
Family G2-like
Protein Properties Length: 717aa    MW: 75741.4 Da    PI: 7.2077
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_011395797.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like86.13.5e-27152205155
         G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                     k+rl+Wt+eLH+rF++a+++L G ++A+Pk+il +m+v+g+t+e+v+SHLQkYRl
  XP_011395797.1 152 KARLVWTQELHNRFINALSHL-GLKQAVPKNILTMMNVDGMTRENVASHLQKYRL 205
                     68*******************.9*******************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.329149208IPR017930Myb domain
SuperFamilySSF466897.7E-19151209IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.3E-27151210IPR009057Homeodomain-like
TIGRFAMsTIGR015574.4E-24152205IPR006447Myb domain, plants
PfamPF002494.6E-6155204IPR001005SANT/Myb domain
SuperFamilySSF472408.12E-97366715IPR009078Ferritin-like superfamily
Gene3DG3DSA:1.10.620.207.9E-132366715IPR012348Ribonucleotide reductase-related
CDDcd010505.90E-139378692No hitNo description
PfamPF034052.5E-130379711IPR005067Fatty acid desaturase, type 2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0006631Biological Processfatty acid metabolic process
GO:0055114Biological Processoxidation-reduction process
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0045300Molecular Functionacyl-[acyl-carrier-protein] desaturase activity
Sequence ? help Back to Top
Protein Sequence    Length: 717 aa     Download sequence    Send to blast
MSGDSPGTSR VSLGDLTEYD TLILPTGDSP SPARSEPPPP PLTSQDVSAA AAATMLAFAE  60
MPYSATGQSL HEAGTAGTLA GVKRPNPEPD SGAGAWTPRS PTAPAPDPGG PAAASSAGGL  120
PSGAGGTGLG SAALEHSGTA GSVESGEQGG RKARLVWTQE LHNRFINALS HLGLKQAVPK  180
NILTMMNVDG MTRENVASHL QKYRLYLKKI GGFTDRERVD SAALQRIHEQ NVAQMAAQQA  240
MQQSLAAGGG MRYGGPSGLP PAAAYGYGGH VGGAADPGPH VARADAVHVA RAVAGLEPGG  300
AVQHGHAGTG VEVSTMKTIQ SRHAGPIGHV QSGRRSAGRA GSRMATPVAA ATVAAPRSAL  360
NLSPTIIRQE VLHSASAQQL DCVASLAPVF ESQILPLLTP VDEMWQPTDF LPASNSEAFF  420
DQIGDLRARS AAIPDDLLVC LVGDMITEEA LPTYMAMLNT LDVVRDETGH SQHPYAKWTR  480
CAPRPQGHEN RHGDLLNKYM WLTGRVDMLA VERTIQRLIS SGMDPGTENH PYHAFVFTSF  540
QERATKLSHG STARLAVAAG DEALAKICGT IARDESRHEA AYTRTMDAIF QRDPSGAMVA  600
FAHMMMRKIT MPAHLMDDGQ HGARNGGRNL FDDFAAVAER AGVYTAGDYI GILRHLIRRW  660
DVEGKTGLTP EGRAAQELLC SLPARFEKLA QRKAKKAEAA PPAAVEFSWI FNRPVYA
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1oq4_E1e-12636271519361Acyl-[acyl-carrier protein] desaturase
1oq4_F1e-12636271519361Acyl-[acyl-carrier protein] desaturase
1oq7_A1e-12636271519361Acyl-[acyl-carrier protein] desaturase
1oq7_B1e-12636271519361Acyl-[acyl-carrier protein] desaturase
1oq7_C1e-12636271519361Acyl-[acyl-carrier protein] desaturase
1oq7_D1e-12636271519361Acyl-[acyl-carrier protein] desaturase
1oq7_E1e-12636271519361Acyl-[acyl-carrier protein] desaturase
1oq7_F1e-12636271519361Acyl-[acyl-carrier protein] desaturase
1oq9_A1e-12636271519361Acyl-[acyl-carrier protein] desaturase
1oqb_A1e-12636271519361Acyl-[acyl-carrier protein] desaturase
1oqb_B1e-12636271519361Acyl-[acyl-carrier protein] desaturase
1oqb_C1e-12636271519361Acyl-[acyl-carrier protein] desaturase
1oqb_D1e-12636271519361Acyl-[acyl-carrier protein] desaturase
1oqb_E1e-12636271519361Acyl-[acyl-carrier protein] desaturase
1oqb_F1e-12636271519361Acyl-[acyl-carrier protein] desaturase
2xz0_A1e-12636271519361ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE, CHLOROPLASTIC
2xz0_B1e-12636271519361ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE, CHLOROPLASTIC
2xz0_C1e-12636271519361ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE, CHLOROPLASTIC
2xz1_A1e-12636271519361ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE, CHLOROPLASTIC
2xz1_B1e-12636271519361ACYL-[ACYL-CARRIER-PROTEIN] DESATURASE, CHLOROPLASTIC
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtConverts stearoyl-ACP to oleoyl-ACP by introduction of a cis double bond between carbons 9 and 10 of the acyl chain. {ECO:0000250|UniProtKB:P22337}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011395797.10.0Acyl-[acyl-carrier-protein] desaturase 5, chloroplastic
SwissprotA2XSL41e-131STAD5_ORYSI; Stearoyl-[acyl-carrier-protein] 9-desaturase 5, chloroplastic
TrEMBLA0A087SB270.0A0A087SB27_AUXPR; Acyl-[acyl-carrier-protein] desaturase 5, chloroplastic
STRINGA0A087SB270.0(Auxenochlorella protothecoides)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G59570.15e-26G2-like family protein