PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | 902822 | ||||||||
Common Name | ARALYDRAFT_902822, TKI1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Family | MYB_related | ||||||||
Protein Properties | Length: 741aa MW: 81817.4 Da PI: 6.0195 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 25.1 | 4e-08 | 57 | 99 | 3 | 47 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 +WT +E+e + a +q G++ +++I ++++ + q++++++ + 902822 57 AWTHQEEESFFTALRQVGKN-FEKITSRVQ-SKNKDQVRHYYYRL 99 6*****************99.*********.***********976 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 1.12E-10 | 49 | 104 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 1.9E-5 | 52 | 102 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51293 | 13.52 | 53 | 104 | IPR017884 | SANT domain |
SMART | SM00717 | 5.1E-6 | 54 | 102 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 1.21E-5 | 57 | 100 | No hit | No description |
Pfam | PF00249 | 3.1E-6 | 57 | 99 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0016310 | Biological Process | phosphorylation | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0016301 | Molecular Function | kinase activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 741 aa Download sequence Send to blast |
MLKQFAHYCE MQAELKPEGP NGEGRLSNQN SNPNLLSSAS ITVAQFPAKK PTRQWAAWTH 60 QEEESFFTAL RQVGKNFEKI TSRVQSKNKD QVRHYYYRLV RRMNKLLGPE LSLDAKNPKD 120 TNAAMLRWWS LLEKYSCKAS KLHLKPRRFK LFIEALEHQL LKDRRKSIRK RACQGENLSS 180 ASLGNISSHS RERGLDNRPF KLILSDGQNV KKLGPGRAST KHGESLGVIL GEEKEDTAFG 240 RGGRQRRKQG YRKWEKAAID GVSLVADAAE HLERTSIDKD MDDQTELGPS RYLTGKSPLS 300 LCSSGDILLS DTNMQFSAKL KLQLFPIDEC TRRSLEMDKH NPHLELTLSN RKKISSVLEH 360 LNRKWGSASC ATGELLLFPY NARKETVTCH QRWTHDSFLS AAEVHSMVGS PSVFRLRYGW 420 FVHDASGSII SQVPTSDPCP SLEDDMNVDG VNEVNMLLTE SGPLSVHSTA EQATSVEPSQ 480 GLVCASGEIH DHPAESRDDY EAASTTITPL EHLSSGNAQS AGEWADSLTN ISIGDLLSEV 540 PDDIDSDGVD PPATEGSHYL LRDVPFASDS FDAAIAAHIL RHQNKPSALL PLTSGSSSLW 600 DDEETRDAFS FQKNRLADST ELASVASHRV NGEPSQLVEV LSGDEGSCNP PDHGDPMEEG 660 PTDPQTMDSP GKTPCGLADV YWPDSLGPLD LDIRSSKYTE DLILSESLGG LSRLIATSLD 720 AFQNCSLFGF DNKKDKSNMV * |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | 902822 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY064068 | 0.0 | AY064068.1 Arabidopsis thaliana unknown protein (At2g36960) mRNA, complete cds. | |||
GenBank | AY096376 | 0.0 | AY096376.1 Arabidopsis thaliana unknown protein (At2g36960) mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_002879635.1 | 0.0 | TSL-kinase interacting protein 1 isoform X2 | ||||
Swissprot | Q8LJT8 | 0.0 | TKI1_ARATH; TSL-kinase interacting protein 1 | ||||
TrEMBL | D7LJ99 | 0.0 | D7LJ99_ARALL; Tsl-kinase interacting protein 1 | ||||
STRING | scaffold_402323.1 | 0.0 | (Arabidopsis lyrata) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Malvids | OGEM9633 | 21 | 24 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G36960.1 | 0.0 | TSL-kinase interacting protein 1 |
Link Out ? help Back to Top | |
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Phytozome | 902822 |
Entrez Gene | 9315702 |