PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.ZRX6N
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 273aa    MW: 30243.9 Da    PI: 4.8923
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.ZRX6NgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP263.73.8e-20105154356
          AP2   3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56 
                  y+G+r+++ +g+W+AeIrdp     +  r++lg+f taeeAa+a++ a+++++g+
  Araip.ZRX6N 105 YRGIRQRP-WGKWAAEIRDPH----KgVRVWLGTFNTAEEAARAYDDAARRIRGN 154
                  9*******.**********72....35*************************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.102.0E-33104162IPR001471AP2/ERF domain
SuperFamilySSF541714.71E-23104162IPR016177DNA-binding domain
PROSITE profilePS5103224.131104161IPR001471AP2/ERF domain
SMARTSM003801.7E-38104167IPR001471AP2/ERF domain
PfamPF008472.8E-13105153IPR001471AP2/ERF domain
PRINTSPR003676.6E-12105116IPR001471AP2/ERF domain
CDDcd000181.53E-23105163No hitNo description
PRINTSPR003676.6E-12127143IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0008219Biological Processcell death
GO:0009723Biological Processresponse to ethylene
GO:0009735Biological Processresponse to cytokinin
GO:0009753Biological Processresponse to jasmonic acid
GO:0010286Biological Processheat acclimation
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0051707Biological Processresponse to other organism
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0005886Cellular Componentplasma membrane
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 273 aa     Download sequence    Send to blast
MCGGAIISDF IGVKRGRKLL SQDLWAELDP FSDFLGFDAA TVTANNSNNK DQPLIPQIPD  60
NNNNNNKVIA CDKVLGKEKT VVGGGAEDKK TKGPNPRQRV RKNLYRGIRQ RPWGKWAAEI  120
RDPHKGVRVW LGTFNTAEEA ARAYDDAARR IRGNKAKLNF PDASDDNVVV APPSAKKQCL  180
GNEMLSQVEI QSLVPPLIST MQTGSDNGSI EGLDSDLSQQ ISDLEWFLGS ENEQPLQIGG  240
DAVWNDVNNY NDNNNNMDLW MLDDVVMPSR YMV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A8e-24105161360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00109PBMTransfer from AT3G16770Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.ZRX6N
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016197925.10.0ethylene-responsive transcription factor RAP2-3
RefseqXP_025646580.10.0ethylene-responsive transcription factor RAP2-3
TrEMBLA0A444WPY71e-167A0A444WPY7_ARAHY; Uncharacterized protein
STRINGGLYMA09G04630.19e-79(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF48923353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G16770.13e-42ethylene-responsive element binding protein