PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.Z9VQ5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | Dof | ||||||||
Protein Properties | Length: 188aa MW: 20040.4 Da PI: 9.5277 | ||||||||
Description | Dof family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-Dof | 105.7 | 2.6e-33 | 1 | 48 | 14 | 61 |
zf-Dof 14 tntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkks 61 +ntkfCyynnyslsqPryfCkaC+ryWt+GGalrnvPvGgg+rk k++ Araip.Z9VQ5 1 MNTKFCYYNNYSLSQPRYFCKACKRYWTHGGALRNVPVGGGSRKPKRA 48 69******************************************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50884 | 24.642 | 1 | 47 | IPR003851 | Zinc finger, Dof-type |
Pfam | PF02701 | 4.9E-28 | 1 | 47 | IPR003851 | Zinc finger, Dof-type |
ProDom | PD007478 | 4.0E-20 | 2 | 47 | IPR003851 | Zinc finger, Dof-type |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 188 aa Download sequence Send to blast |
MNTKFCYYNN YSLSQPRYFC KACKRYWTHG GALRNVPVGG GSRKPKRAKL ATNHSSEATV 60 VGVPAPSSVS SVTPFFQGGV GGFLSSSLGG SGFNNVGSHH FFDQMMIGGA DEQQGFMMNE 120 NRALPLMNPD GSMWSTLMTT TTHINNNNNS SGASSSASAS ADAAALMLNQ WPSTVTRFPP 180 PPPDPSSF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.Z9VQ5 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016179394.1 | 1e-138 | dof zinc finger protein DOF1.1-like | ||||
Refseq | XP_025680413.1 | 1e-138 | dof zinc finger protein DOF1.1-like | ||||
TrEMBL | A0A444WYF9 | 1e-137 | A0A444WYF9_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA13G31110.1 | 5e-26 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF28660 | 2 | 2 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G21050.1 | 4e-27 | Dof-type zinc finger domain-containing protein |