PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.Z8IAR
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 296aa    MW: 32765.9 Da    PI: 7.9297
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.Z8IARgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.32.8e-13121172155
                  CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  Araip.Z8IAR 121 QRMTHIAVERNRRKQMNEYLAVLRSLMPPS---YVQRGDQASIIGGAINFVKELE 172
                  79****************************...9******************995 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000834.62E-14119176No hitNo description
Gene3DG3DSA:4.10.280.101.7E-13120176IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.459120171IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474597.85E-17120189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-10121172IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003539.7E-10126177IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MALEAVVFPQ DPLSYTCNKD NYLYSIAASG GPWSNHEEPY GNNVTDSMDQ WDSYNSNSSP  60
EPCITTIDHD QASVPGANNS PLAPVEAATS SNTVAAGAAS TGRRKRRRTK SVKNKEEIEN  120
QRMTHIAVER NRRKQMNEYL AVLRSLMPPS YVQRGDQASI IGGAINFVKE LEQLVQCMNG  180
QKKTKQEHHN NTVPFAEFFM FPQYSTHATR YCNNDNTVYP PCIEAGTKKP SWSSTAAVDI  240
EVSLVDSHAN MKILSKKQHG LLVKMVIGLQ NLGFTILHLN VTTANDMVLT SVSVKV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1103107RKRRR
2103108RKRRRT
3121132RMTHIAVERNRR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.Z8IAR
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016167495.10.0transcription factor bHLH96
RefseqXP_025668088.10.0transcription factor bHLH96
TrEMBLA0A444Y9910.0A0A444Y991_ARAHY; Uncharacterized protein
STRINGGLYMA14G35560.11e-120(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF71834135
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.13e-66bHLH family protein