PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.Z6F82

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

FAR1

Protein Properties

Length: 104aa MW: 11996.9 Da PI: 10.4385

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.Z6F82	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	61.4	2.7e-19	11	95	1	89
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHel 89 kfYn+YAk +GFs r+++++k+ +ei+++ +Cs+egk +++ + +++t+++ +C a++ ++ k g w ++k++l+H+H++ Araip.Z6F82 11 KFYNDYAKAAGFSRRVRSKNKK--RNEIKNQLITCSREGKWKSKISP---NEKTNPTADLNCPARIYIHTLKdVGAWIISKIVLHHSHPC 95 6***********99987776..5669*********998877...8999**********998879************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03101	2.2E-16	11	95	IPR004330	FAR1 DNA binding domain

Sequence ? help Back to Top
Protein Sequence Length: 104 aa Download sequence Send to blast
MTFNTLEDAA KFYNDYAKAA GFSRRVRSKN KKRNEIKNQL ITCSREGKWK SKISPNEKTN 60 PTADLNCPAR IYIHTLKDVG AWIISKIVLH HSHPCHLTQV EMLK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.Z6F82

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020979233.1	6e-58	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_020992539.1	6e-58	protein FAR1-RELATED SEQUENCE 5-like
Refseq	XP_020997160.1	2e-58	protein FAR1-RELATED SEQUENCE 5-like
TrEMBL	A0A445AE06	8e-66	A0A445AE06_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF21	14	477

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G43280.1	4e-08	FAR1 family protein