PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.Z34JG
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 66aa    MW: 7876.87 Da    PI: 9.7643
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.Z34JGgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR124.31e-071266690
         FAR1 66 lkvkkek.dgkwevtkleleHnHela 90
                 +++k+++ +gkw+v++++ +HnHela
  Araip.Z34JG  1 MRIKRKDgSGKWYVSQFVDDHNHELA 26
                 89999999****************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.4E-5126IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 66 aa     Download sequence    Send to blast
MRIKRKDGSG KWYVSQFVDD HNHELASGKF VDYLRSHRRI SEVEIAQMTS LREGRNWHVL  60
VDFEKS
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.Z34JG
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016206364.13e-30protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444ZAR31e-25A0A444ZAR3_ARAHY; Uncharacterized protein
TrEMBLA0A444ZAR41e-25A0A444ZAR4_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF9185237
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.14e-09FAR1-related sequence 5