PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.YB35N
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Nin-like
Protein Properties Length: 912aa    MW: 100977 Da    PI: 6.8506
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.YB35NgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK92.92.3e-29241291252
       RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                  ek++sl++l++yFs+++kdAAk+Lgvc+T+LKriCRq+GI+RWP+Rki+++
  Araip.YB35N 241 EKNVSLSVLQQYFSGSLKDAAKSLGVCPTTLKRICRQHGIARWPSRKINKV 291
                  79***********************************************97 PP
2RWP-RK90.21.7e-28570620252
       RWP-RK   2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 
                  +k+ sl++l++yFs+++kdAAk+Lgvc+T+LKriCRq+GI+RWP+Rki+++
  Araip.YB35N 570 KKNFSLSVLQQYFSGNLKDAAKSLGVCPTTLKRICRQHGIARWPSRKINKV 620
                  6899*********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151915.687223311IPR003035RWP-RK domain
PfamPF020426.8E-27243291IPR003035RWP-RK domain
PROSITE profilePS5151916.722552641IPR003035RWP-RK domain
PfamPF020424.2E-26573620IPR003035RWP-RK domain
SuperFamilySSF542775.23E-17823909No hitNo description
Gene3DG3DSA:3.10.20.2401.8E-19825898No hitNo description
PROSITE profilePS5174516.406827909IPR000270PB1 domain
SMARTSM006661.6E-13827908IPR000270PB1 domain
PfamPF005643.6E-12830900IPR000270PB1 domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 912 aa     Download sequence    Send to blast
MEDQFFSEGE GIGYWTPPGA QFDGPSMIDN GIKNLKIPGE KTVLCIEESA CYINDIVVGG  60
FVRACVKHYL EEGQGVAGKA LQSNRPFFYS DVKAYNISEY PIVHHARKYK LNAAVAVRLR  120
SIHTNDDDYI IEFFLPVIMN GSQEQQLLLD NLSDTMQRMC QSLRIVSDDE LYGIEGSQVQ  180
FSKEEGSSFF SMYRGNSHMA PEGDHDSVQP MSLTNNETEA AHNQAMDGSR KQTEKKKSTV  240
EKNVSLSVLQ QYFSGSLKDA AKSLGVCPTT LKRICRQHGI ARWPSRKINK VNHSKPIGMD  300
DGGLRQEPFP VSILESSRCD IAYHSPNTLV ANEMENYLNG ADKLGEHHNP ATSSMSDSEG  360
IGDEASRIRT KDGRKIPGEK TVLCIEESAC YTNDIVVGGF VRACVEHYLE EGQGVAGKAL  420
QSNRPFFYPD VKAYNISEYP LVHHARKYKL NAAVAIRLRS IHTNDDDYII EFFLPVNMNG  480
SEEQQLLLDN LAGTMQRKCQ TLRKVSDAEL HGIEGSSFCS MSRGNSHMAP DGDHDSVQPM  540
SVTNNETEAA HNQAMEGSRK QIEKKRSPVK KNFSLSVLQQ YFSGNLKDAA KSLGVCPTTL  600
KRICRQHGIA RWPSRKINKV NRSLKKIQTV LDSGVEGGLK FDPYKGGFMS GGSSNQEINA  660
HKSSLFRKKC SVKYPDPAAK DAVTISPASG SKGENLAVNQ LLHSDILISN SKGELKKNKA  720
FSVDVDSKPI AMGDGGLRQE PFPVSILESS RCDVAYHSPN SLVADEMETY LNGADKLGEH  780
HNPTTSSMTD SSSGSCSILR PSSSGSPKFE NRKHLKAKSP CVRRGSKIIV KAAYGENIIR  840
FKFDPAAGCL QLYEEVATRF KLQIGSFQLE YLDDEDEWVR MVTDTDLEEC IEMFDDLGTA  900
VKFLVREPCS NS
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor. {ECO:0000250}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.YB35N
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025642200.10.0protein NLP9 isoform X5
SwissprotQ9M1B01e-135NLP9_ARATH; Protein NLP9
TrEMBLA0A445A8Z40.0A0A445A8Z4_ARAHY; Uncharacterized protein
STRINGGLYMA12G05390.40.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF34643465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59580.21e-137Nin-like family protein