PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.Y6XIC
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family C2H2
Protein Properties Length: 300aa    MW: 33015.9 Da    PI: 6.7273
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.Y6XICgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H211.90.00068114136123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  y+C+ C+++F++   L  H  +H
  Araip.Y6XIC 114 YECKTCNRTFPSFQALGGHRASH 136
                  99**********99999998887 PP
2zf-C2H213.30.00026205227123
                  EEETTTTEEESSHHHHHHHHHHT CS
      zf-C2H2   1 ykCpdCgksFsrksnLkrHirtH 23 
                  ++C++Cg  F++   L  H+r+H
  Araip.Y6XIC 205 HECSICGSEFTSGQALGGHMRRH 227
                  78********************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF576671.11E-8113136No hitNo description
SMARTSM003550.052114136IPR015880Zinc finger, C2H2-like
PfamPF139125.6E-13114138IPR007087Zinc finger, C2H2
PROSITE profilePS5015710.305114141IPR007087Zinc finger, C2H2
PROSITE patternPS000280116136IPR007087Zinc finger, C2H2
SuperFamilySSF576671.11E-8200227No hitNo description
PROSITE profilePS501579.743205227IPR007087Zinc finger, C2H2
SMARTSM003550.019205227IPR015880Zinc finger, C2H2-like
PfamPF139123.4E-11205228IPR007087Zinc finger, C2H2
PROSITE patternPS000280207227IPR007087Zinc finger, C2H2
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046872Molecular Functionmetal ion binding
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    Send to blast
MEMELGIGTE EFLNDASHIA KGKRTKRHKP FSPCDVAAIT SSSSSANDSA SFSSTTTFQD  60
EEQDMANCLI LLAQGKTGGE ETDDDEEDNK MREKSRRISE VTTTATTKIG FYIYECKTCN  120
RTFPSFQALG GHRASHKKPK VTSDDKKKPQ PQLQPQPQPN TLALITNCDF EETKQARVMT  180
TSPPISLQLG YGGASNNNNG KPKIHECSIC GSEFTSGQAL GGHMRRHRTA VITTTSPQPT  240
CDLPATLEVV KRPRNLLELD LNLPAPADDD HHHRDSQFQF SSTQKTMMLS AAPPLVDCHY
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.Y6XIC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU4777960.0EU477796.1 Arachis hypogaea zinc finger protein ZFP133 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016172032.10.0zinc finger protein ZAT5
RefseqXP_025673680.10.0zinc finger protein ZAT5
TrEMBLA0A444Y7J90.0A0A444Y7J9_ARAHY; Uncharacterized protein
STRINGXP_007150141.15e-77(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF58634141
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G28200.17e-39C2H2 family protein