PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.X32YN

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

NZZ/SPL

Protein Properties

Length: 395aa MW: 43617.7 Da PI: 8.2154

Description

NZZ/SPL family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.X32YN	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NOZZLE	21.4	4.2e-07	38	93	50	104
NOZZLE 50 ktaqqkqkkptlrgmgvaklerfiieeekkkl.vvatvgdtssvaaisntatrlpv 104 + + kqkk rg+gva+le+ ++ee +kk v+ + sva++ t+ lp+ Araip.X32YN 38 PSKKPKQKKVPQRGLGVAQLEKIRMEELQKKNaVTILSPQQDSVASTKPTCMHLPI 93 34456899999**************888873555566788899999999996 PP

Sequence ? help Back to Top
Protein Sequence Length: 395 aa Download sequence Send to blast
MEDDHNTKVA QELQKQTYSS DGNGNGSGGG GGGGGGRPSK KPKQKKVPQR GLGVAQLEKI 60 RMEELQKKNA VTILSPQQDS VASTKPTCMH LPIQNFHHSS QPPPRSQAEF RPMSLKQMLD 120 AKVPGTGTVP LTHNSGFEEE RFWVDPAAMQ FLPSFPFESN PVWPLPYLGQ KAPQFHHQLT 180 SMVNVSTPPM PHYSREPPSN QNCNDNGLFA RQAEKIVGVK RSYPFCLDAP PVPAYNYKLH 240 PFAETQTNAT TLCNSGFNND ASNSTLRELP SCSASNSELN SRKRNKENEN FVGDFLTLAS 300 PTSTSSPPSK TKPFSAFLAI PNKDNPESES PSFQDTIEDQ VPQVQAFNRF NQQKQPFYYF 360 FPPVADELQI GLSAARTQNV NEAKENVDLN LKLGK

Sequence ? help Back to Top

Protein Sequence Length: 395 aa Download sequence Send to blast

MEDDHNTKVA QELQKQTYSS DGNGNGSGGG GGGGGGRPSK KPKQKKVPQR GLGVAQLEKI  60
RMEELQKKNA VTILSPQQDS VASTKPTCMH LPIQNFHHSS QPPPRSQAEF RPMSLKQMLD  120
AKVPGTGTVP LTHNSGFEEE RFWVDPAAMQ FLPSFPFESN PVWPLPYLGQ KAPQFHHQLT  180
SMVNVSTPPM PHYSREPPSN QNCNDNGLFA RQAEKIVGVK RSYPFCLDAP PVPAYNYKLH  240
PFAETQTNAT TLCNSGFNND ASNSTLRELP SCSASNSELN SRKRNKENEN FVGDFLTLAS  300
PTSTSSPPSK TKPFSAFLAI PNKDNPESES PSFQDTIEDQ VPQVQAFNRF NQQKQPFYYF  360
FPPVADELQI GLSAARTQNV NEAKENVDLN LKLGK

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.X32YN

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020964847.1	0.0	uncharacterized protein LOC107611941 isoform X1
Refseq	XP_025674110.1	0.0	uncharacterized protein LOC112773252
TrEMBL	A0A444Y3R0	0.0	A0A444Y3R0_ARAHY; Uncharacterized protein
STRING	GLYMA12G35701.1	1e-90	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF8956	12	13