PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.WL58S | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | FAR1 | ||||||||
Protein Properties | Length: 185aa MW: 20865.7 Da PI: 8.2131 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 57.4 | 4.7e-18 | 65 | 151 | 1 | 91 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHelap 91 kfY++YAk +GFs+r+++++k+ +ei+++ +Cs+egk +++ + +++t+++ +C ++ ++ k g w ++k++l+H+H+++p Araip.WL58S 65 KFYKDYAKAAGFSTRVRSTNKK--GNEIKNQLITCSREGKWKSKISP---TEKTNPTAGLNCPIRIYIHTLKdVGAWIISKVVLHHSHPCCP 151 6****************98887..8889*************998877...8999**************998879***************986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 3.5E-15 | 65 | 151 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 185 aa Download sequence Send to blast |
MDDSTSDCQL NQSEVDFEFE SNEVPDLTCC RNGCRSGSPW PLSVVDEQLV PKVGMTFKTL 60 EDAAKFYKDY AKAAGFSTRV RSTNKKGNEI KNQLITCSRE GKWKSKISPT EKTNPTAGLN 120 CPIRIYIHTL KDVGAWIISK VVLHHSHPCC PTQAEVLKQH RELSMFVRRT IENNEEAGIR 180 PSKTF |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.WL58S |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | HQ637178 | 1e-157 | HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020997160.1 | 1e-104 | protein FAR1-RELATED SEQUENCE 5-like | ||||
TrEMBL | A0A444ZKJ0 | 1e-127 | A0A444ZKJ0_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF21 | 14 | 477 |