PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.W8KP6
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bZIP
Protein Properties Length: 368aa    MW: 41586.2 Da    PI: 8.4565
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.W8KP6genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_136.51e-1177109435
                  XCHHHCHHHHHHHHHHHHHHHHHHHHHHHH.HH CS
       bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLee.kv 35 
                  +k +rr+++NReAAr+sR+RKka++++Le  +v
  Araip.W8KP6  77 DKIQRRLAQNREAARKSRLRKKAYVQQLEScRV 109
                  799*************************97344 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1701.4E-776123No hitNo description
PfamPF001702.1E-877112IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.05E-778119No hitNo description
PROSITE patternPS0003608196IPR004827Basic-leucine zipper domain
PfamPF141445.8E-28168240IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MNSPTSHFVP PRRMGVYDPI HQISMWEENF RSNVSLSAST LLIDDAEIKF DNQSEYASHG  60
IPGTSKQYDQ EANRLADKIQ RRLAQNREAA RKSRLRKKAY VQQLESCRVK LMQLEQEVDH  120
AKQQGLHIGG TGLGSNSLGF AASLNSGIAN FEMEYGRWLE ERNRHTLALR NALSSHMGDV  180
ELGELVDGTM NHYFKLFGMK SAAAKADAFY VMSGMWKSSA ERFFFWIGGF RPSEILKILV  240
PRIETMTEQQ RSDISNLGKS CQQAEDALSQ GMDKLQQMVS ESVAAGQLEE QTNTPNMSTA  300
MERLAALVSF VNQADHLRQE TLLQMSRILT KRQAARWLLA LGEYFQRLQA LSSFWANRPS  360
KPAECLIP
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. May be involved in the induction of the systemic acquired resistance (SAR) via its interaction with NPR1. Could also bind to the Hex-motif (5'-TGACGTGG-3') another cis-acting element found in plant histone promoters.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.W8KP6
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016189946.10.0transcription factor TGA1 isoform X1
RefseqXP_016189947.10.0transcription factor TGA1 isoform X1
RefseqXP_016189948.10.0transcription factor TGA1 isoform X1
RefseqXP_020975028.10.0transcription factor TGA1 isoform X1
RefseqXP_025637951.10.0transcription factor TGA1 isoform X1
RefseqXP_025637952.10.0transcription factor TGA1 isoform X1
RefseqXP_025637953.10.0transcription factor TGA1 isoform X1
RefseqXP_025637954.10.0transcription factor TGA1 isoform X1
SwissprotQ392371e-166TGA1_ARATH; Transcription factor TGA1
TrEMBLA0A445DS500.0A0A445DS50_ARAHY; Uncharacterized protein
STRINGGLYMA08G14840.50.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF109634104
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65210.51e-168bZIP family protein
Publications ? help Back to Top
  1. Duarte JM, et al.
    Expression pattern shifts following duplication indicative of subfunctionalization and neofunctionalization in regulatory genes of Arabidopsis.
    Mol. Biol. Evol., 2006. 23(2): p. 469-78
    [PMID:16280546]
  2. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  3. Herrera-Vásquez A, et al.
    Transcriptional Control of Glutaredoxin GRXC9 Expression by a Salicylic Acid-Dependent and NPR1-Independent Pathway in Arabidopsis.
    Plant Mol. Biol. Rep., 2018.
    [PMID:26696694]
  4. Gutsche N,Zachgo S
    The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding.
    PLoS ONE, 2016. 11(4): p. e0153810
    [PMID:27128442]
  5. Sun T, et al.
    TGACG-BINDING FACTOR 1 (TGA1) and TGA4 regulate salicylic acid and pipecolic acid biosynthesis by modulating the expression of SYSTEMIC ACQUIRED RESISTANCE DEFICIENT 1 (SARD1) and CALMODULIN-BINDING PROTEIN 60g (CBP60g).
    New Phytol., 2018. 217(1): p. 344-354
    [PMID:28898429]