PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.W3SNY
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bZIP
Protein Properties Length: 550aa    MW: 61126.8 Da    PI: 7.8947
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.W3SNYgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.61.5e-09212254345
                  XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 
                  + k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  Araip.W3SNY 212 DQKTLRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 254
                  66889*************************9777777666554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.8E-8210273IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.415212256IPR004827Basic-leucine zipper domain
PfamPF001701.2E-6213254IPR004827Basic-leucine zipper domain
CDDcd147082.58E-21214266No hitNo description
SuperFamilySSF579598.75E-7214257No hitNo description
Gene3DG3DSA:1.20.5.1702.0E-7215258No hitNo description
PROSITE patternPS000360217232IPR004827Basic-leucine zipper domain
PfamPF141441.1E-29297371IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 550 aa     Download sequence    Send to blast
MGSRARTVNV SSTGDSNNVV NGMPSYAPPP PMPSSSSSIR NWLCSGRTEM SKLGLMCNGA  60
EESLENEDDN KGIDATNVLP SRISEFGNLE QSLGFRVEDA INLSRNPLFN QLQLKSNSQA  120
LGADVQFGAL SKSIANSDIN ISAAIAGSQA LSLQKDSQPN LASTSAGHRE NWGESNMADA  180
SPRTDTSTDD TEDKNQMPER GESSERSKDK ADQKTLRRLA QNREAARKSR LRKKAYVQQL  240
ESSRLKLTQL EQELQRARQQ GIFISSSGDQ THSMSGNGAM AFDVEYARWL EEHNRQTNEL  300
RAAINSHAGD IELRTIVDNF MTQFDDIFRL KGIAAKADVF HILSGMWKTP AERCFMWIGG  360
FRSSELLKLL VNQLEPLTEQ QLMGIYNLQQ SSQQAEDALS QGMDALQQSL AETLANGAPN  420
PSGSSGNVAN YMGQMAMAMG KLGTLEGFLR QKDYFQLVCM CMLRQVILQY AREMIENASS  480
LHRSKVFQTR AYRLIMGRLV PEADNLRQQT LQQMLRILTT RQSARALLAI SDYFSRLRAL  540
SSLWLARPRE
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.W3SNY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020959473.10.0transcription factor TGA2.3 isoform X4
RefseqXP_025660645.10.0transcription factor TGA2.3 isoform X2
SwissprotO241600.0TGA21_TOBAC; TGACG-sequence-specific DNA-binding protein TGA-2.1
TrEMBLA0A444YHT10.0A0A444YHT1_ARAHY; Uncharacterized protein
STRINGXP_004493401.10.0(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF14703494
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G12250.21e-136TGACG motif-binding factor 6