PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.VYK9W
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 267aa    MW: 30586.7 Da    PI: 9.3665
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.VYK9WgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.32e-093584248
                     SSS-HHHHHHHHHHHHHTTTT....-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  2 grWTteEdellvdavkqlGgg....tWktIartmgkgRtlkqcksrwqkyl 48
                     + WT eE + +  +++    +    +Wkt+a++++ g+t+ q+++r++k++
      Araip.VYK9W 35 QVWTWEENKAFESVIANCFQDaihnNWKTVAARLP-GKTPAQLQERFLKLM 84
                     68****************999**************.************986 PP
2Myb_DNA-binding37.74.7e-12197239447
                      S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      WT +E++l++++ ++lG+  W++I+++  k+Rt  q++s+ qk+
      Araip.VYK9W 197 WTLQEHKLFLQGYEELGKQ-WSKISSEYVKTRTYSQVVSHSQKF 239
                      *****************99.********************9998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007171.5E-53386IPR001005SANT/Myb domain
SuperFamilySSF466891.94E-83495IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.603.7E-63584IPR009057Homeodomain-like
PfamPF002493.6E-73583IPR001005SANT/Myb domain
CDDcd001672.81E-63784No hitNo description
PROSITE profilePS500906.9463784IPR017877Myb-like domain
PROSITE profilePS5129413.289189244IPR017930Myb domain
SuperFamilySSF466899.33E-13190245IPR009057Homeodomain-like
SMARTSM007171.5E-6193242IPR001005SANT/Myb domain
TIGRFAMsTIGR015576.8E-11193243IPR006447Myb domain, plants
Gene3DG3DSA:1.10.10.602.5E-7196234IPR009057Homeodomain-like
CDDcd001672.27E-5197235No hitNo description
PfamPF002499.7E-9197238IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 267 aa     Download sequence    Send to blast
MTEQFFNDTW GYQPPLEMIA AVGGHQPLQS QPQPQVWTWE ENKAFESVIA NCFQDAIHNN  60
WKTVAARLPG KTPAQLQERF LKLMTDVNAI KNGNPENMNI MIPVPATPLE HSLLSIPVVN  120
ATPPPPPPHW THHQHHRMEA LMPAADMAVP MHITLLSSSM SGARREQNQH ANSNIIQHEP  180
LHAASSNNNK RQQTIHWTLQ EHKLFLQGYE ELGKQWSKIS SEYVKTRTYS QVVSHSQKFF  240
KRQEKRARGE NLGRKSMLDI TDYRTIT
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.VYK9W
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020972475.11e-118uncharacterized protein LOC110269155
TrEMBLA0A445AD580.0A0A445AD58_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2382823
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38090.13e-19MYB family protein