PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.V8WVD
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 353aa    MW: 39123.5 Da    PI: 10.4977
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.V8WVDgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix60.34.6e-1953143181
     trihelix   1 rWtkqevlaLiearremeerlrrgk..........lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 
                  rWt+qe l+Lie ++ +e+  + ++          +  p+W+ vs+ +++rg++r+++qC+++w nl ++++kik++e + ++e++s + +
  Araip.V8WVD  53 RWTRQESLVLIESKKLVESGEQINRyqsppgfvvlQTDPKWDMVSSLCQQRGVKRGAVQCRKRWGNLLTDFRKIKKWETNVKDENESFWMM 143
                  8**************76666665444477888888*********************************************99888877765 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.8E-450122IPR009057Homeodomain-like
PfamPF138375.0E-1052143No hitNo description
PROSITE profilePS500906.4753120IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    Send to blast
MESNSEKNIN ISVGSSGGGS EHVPLVTVAK QPTTATETVA KGETRAKATR HPRWTRQESL  60
VLIESKKLVE SGEQINRYQS PPGFVVLQTD PKWDMVSSLC QQRGVKRGAV QCRKRWGNLL  120
TDFRKIKKWE TNVKDENESF WMMRNDKRKE NKLPGFFDSV VYNVLDGGVC TAAAYPLTLI  180
KGPPKQENIS GGGGDRGEGE GVVTASKKDH HRKENNTNST TETGKVNNSS LMLLKTPTVA  240
GAKETVMNMM MVMGSTQKIP LPKLPTSGFQ REGVSQEGHK KRRLSPGNSE HTTNFNNNIV  300
RVLRRNNNML KAHLGAQNMN YQLAREHQKE QTDSLLAALG KLTDALSKIA DKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.V8WVD
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016189625.10.0trihelix transcription factor ASR3-like isoform X2
RefseqXP_025637539.10.0trihelix transcription factor ASR3 isoform X2
TrEMBLA0A444ZYB70.0A0A444ZYB7_ARAHY; Uncharacterized protein
STRINGXP_004503841.11e-131(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF21653375
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33550.16e-55Trihelix family protein