PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.UY1E7
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family CAMTA
Protein Properties Length: 920aa    MW: 103603 Da    PI: 6.4016
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.UY1E7genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1166.35.2e-52271442118
         CG-1   2 lke.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrc 98 
                  ++e k+rwlk+ e++ iL n+++ ++t+ ++++p+ gsl+L+nr+++r+frkDGy+w+kk+dgktv E+he+LK+g+ve+l+cyYah+een++fqrr+
  Araip.UY1E7  27 YQEaKRRWLKPVEVLYILRNHDQCKFTNIPPQKPTGGSLFLFNRRIMRFFRKDGYNWRKKRDGKTVGEAHERLKIGNVEILNCYYAHGEENRSFQRRS 124
                  567699******************************************************************************************** PP

         CG-1  99 ywlLeeelekivlvhylevk 118
                  yw+L+ ++e+ivlvhy+e+k
  Araip.UY1E7 125 YWILDPAYEHIVLVHYRETK 144
                  *****************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143775.45723149IPR005559CG-1 DNA-binding domain
SMARTSM010761.4E-6726144IPR005559CG-1 DNA-binding domain
PfamPF038595.5E-4629142IPR005559CG-1 DNA-binding domain
SuperFamilySSF812968.05E-17415499IPR014756Immunoglobulin E-set
Gene3DG3DSA:2.60.40.101.3E-5415492IPR013783Immunoglobulin-like fold
PfamPF018331.2E-6415489IPR002909IPT domain
Gene3DG3DSA:1.25.40.202.3E-15611705IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.459612707IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484034.2E-15615703IPR020683Ankyrin repeat-containing domain
CDDcd002044.43E-13617703No hitNo description
PfamPF127963.1E-8623703IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.179645677IPR002110Ankyrin repeat
SMARTSM002480.048645677IPR002110Ankyrin repeat
SMARTSM00248480684713IPR002110Ankyrin repeat
SuperFamilySSF525401.17E-8750806IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000153.9754776IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.84755784IPR000048IQ motif, EF-hand binding site
PfamPF006120.019757775IPR000048IQ motif, EF-hand binding site
SMARTSM000157.2E-4777799IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.304778802IPR000048IQ motif, EF-hand binding site
PfamPF006125.7E-5780799IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 920 aa     Download sequence    Send to blast
MPPVLSNYSS VERKKGRSFE YNIDDLYQEA KRRWLKPVEV LYILRNHDQC KFTNIPPQKP  60
TGGSLFLFNR RIMRFFRKDG YNWRKKRDGK TVGEAHERLK IGNVEILNCY YAHGEENRSF  120
QRRSYWILDP AYEHIVLVHY RETKEGNSGS GPIPPLSEGC SPEFSQNRSS RTTLDPGTIS  180
VLGDSCEPSQ NFSSTESMEV TSNIIRNNGM DQLDETDAVL RQLKQQLSLE KENCEEISPT  240
YTEPEILHDL NPQHDERVMY KHKSAAFTVP NDYGQAAYEC NGRQGDNGKN YNQILNCDCP  300
DANENALSWT EVLESCKPAS LTNLPEQHAY EAYGNDSSLH SSRIVLIDSQ ENSQWINSNT  360
VFSCPQDGGT KFPLYSPVEA EELSSDYATL FHQIQIPPPL DADSCLTISQ KQKFTIRRIF  420
PEWCYATETS KVVIIGSFLC LPSNSTWACM FGDIEVPAEI IQDGVICCEA PLHLPGKVTL  480
CVTSGNRESC SEFREFEFRN KTKSCTRCNS METETARSQD ELLLLVTFAQ MLLSPPTIKN  540
DNMEPVYHLP VEQKADDDSW SHVIEALLVG SGTSSGTIDW LLEELLKERL QLWLSGKSRE  600
IDEATGCPLS KKEQGIIHMV AGLGYEWALI PILSCGVNIN FRDIRGWTAL HWAARFGREK  660
MVASLIAAGA YAGAVTDPTS ADPDGKTAAA IAASNGHKGL AELTINRVSK ENIGFTADGV  720
SLAAVRNAAL AAARIQAAFQ LSPRLSHSFG RLRDYNAAAL SIQKKYRGWK GRKDFLALRQ  780
KVVKIQAHVR GYQVRKQYKI IVWAVGVLEK VVLRWRRKGA GLRGYRQDSI DENDDDDFLK  840
VFRKQKVHVA IEKAFSRVLS MVHSNGARQQ YRRMLEMYRE AKAELGSMND EAPLTTSVGD  900
TSNIDDDDEL FQIPGGWETL
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.UY1E7
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025645407.10.0calmodulin-binding transcription activator 4 isoform X1
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A444ZBI90.0A0A444ZBI9_ARAHY; Uncharacterized protein
STRINGGLYMA05G28090.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45482950
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]