PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.U9KHW
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB
Protein Properties Length: 1032aa    MW: 116577 Da    PI: 8.3317
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.U9KHWgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding29.22.2e-09427474347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47 
                      +W+  E+e l  +v+++G g+WktI +      ++R + ++k++w++ 
      Araip.U9KHW 427 KWSSLEEETLRTGVQMFGAGNWKTIQSFYSnvfEHRQAVDLKDKWRNM 474
                      8*********************************************97 PP
2Myb_DNA-binding28.82.8e-099581007147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT...TTS-HHHHHHHHHHH CS
  Myb_DNA-binding    1 rgrWTteEdellvdavkqlGggtWktIartmg...kgRtlkqcksrwqky 47  
                       + +W+  E+e l  +v+++G g+WktI +      ++R + ++k++w++ 
      Araip.U9KHW  958 KRKWSSLEEETLRTGVQMFGAGNWKTIQSFYSdvfEHRLAVDLKDKWRNM 1007
                       569*********************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.607.4E-12420477IPR009057Homeodomain-like
PROSITE profilePS5129411.643420479IPR017930Myb domain
SuperFamilySSF466891.0E-14421477IPR009057Homeodomain-like
SMARTSM007172.5E-7424477IPR001005SANT/Myb domain
CDDcd116608.27E-16426476No hitNo description
PfamPF002491.6E-6427474IPR001005SANT/Myb domain
PROSITE profilePS5129410.8089531012IPR017930Myb domain
Gene3DG3DSA:1.10.10.606.3E-129541009IPR009057Homeodomain-like
SuperFamilySSF466891.79E-149551009IPR009057Homeodomain-like
SMARTSM007177.5E-89571010IPR001005SANT/Myb domain
PfamPF002491.6E-69581007IPR001005SANT/Myb domain
CDDcd116603.72E-169591009No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009901Biological Processanther dehiscence
GO:0010152Biological Processpollen maturation
GO:0043067Biological Processregulation of programmed cell death
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 1032 aa     Download sequence    Send to blast
MDPDIARWVA EFHLRSSAPD SLVSKILKVL NLSGADPNLK KTLHLRTLRS QLCNASITET  60
ALEILEQIEA IDRNDAVPII DSMRRAYCAV AVECTVKYLA ASDDGTTSGK YLSAVTRIWR  120
GRVEELEQRQ SELFFDETAR WRDDIEAALF DTRVSDRLKE LNTRNDAFTE VRFYLQEVWE  180
TMGPSFLESV AEMTKNKVKT KGKGKGLPNV ILNPVPETIV AGCTTGVCRN ASGAEQARDH  240
GVDDNGDGDN DGSRCMDGVE VKRAEGSVDG TQEHAKKKKA RGSPQLQRKP PAFRRCSRGV  300
KMSTAEELGT ERSWRKNDTN HDRSKLARKG TNHEQPMENH SGDVDVRNSN TCRTIFPYQP  360
KDAEHKKSPS VHHSRVKAER PNSIELNKTA HKRPKLMEPS GTSQTYEWND SIENMPDGMQ  420
PRRKNRKWSS LEEETLRTGV QMFGAGNWKT IQSFYSNVFE HRQAVDLKDK WRNMMRSSPN  480
LPIRVVLTAE FSTESKQTMD PDIARWVAEF HLRSSAPDSL VSKILRVLNL SGADPKLKKT  540
LLLRTLRSQL CNASITETAL EILEQIEAID RNDAVPIIDS MRRAYCAVAV ECTVKFLAAS  600
YDGTTSGEYL SAVTRIWRGR VEELEQRQSE LFFDEIARWR DDIEAALFDT RVSDRLKELN  660
TRNDAFTEVR FYLQEVWETM GPSFLESVAE QRTNKVKTKG KGKGLPNVIL NPVPETRVAG  720
CTTGVCRNAS GAEHARDHGV DDNGDDDNDG SRCMDGVEVK RAEGSVDGTQ EPAKEKKARG  780
NPQLQRKLPA FRRCSRGVKM SSAEELGTER SWRKNDTVLS GEVKTARESL KSSFSELRAL  840
VNDPLPEALD ISDAVRSKLA RKGTNHEQPM ENHSRDVDVP NSNTCRAIIP YQPKDAEHKK  900
SPSVRHSRVN AERPNSTEPN NTAHKRPSLM EPNGTSQTYE WNDSIENMPN GMQLRRKKRK  960
WSSLEEETLR TGVQMFGAGN WKTIQSFYSD VFEHRLAVDL KDKWRNMMRY INARLFGKLE  1020
TEGNAADFVA ID
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.U9KHW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020971349.10.0uncharacterized protein LOC107640744 isoform X1
RefseqXP_020971351.10.0uncharacterized protein LOC107640744 isoform X1
RefseqXP_020971354.10.0uncharacterized protein LOC107640744 isoform X1
TrEMBLA0A445AMI70.0A0A445AMI7_ARAHY; Uncharacterized protein
STRINGXP_004500362.11e-143(Cicer arietinum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF28243260
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G15720.15e-19TRF-like 5