PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.U4091
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 157aa    MW: 18077.7 Da    PI: 8.5861
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.U4091genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR136.81.3e-1151136190
         FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  kfY++Y k++ Fs+r+++++k+   +ei+++  +C+++gk +++ +    +++t+++   +   ++ +   k  g+w + k++l+H+H+++
  Araip.U4091  51 KFYKDYLKTAAFSTRVRSTNKK--GNEIKNKLITCNRKGKWKSKISP---TEKTNPSAGLNYPVRIYIYILKdIGVWIIFKVVLHHSHPCC 136
                  6****************98887..888**************999877...777888888888888888776669**************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.3E-851136IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 157 aa     Download sequence    Send to blast
MDDSTSDCQL NQSKVDFEFE SNEVPEPLCN VDEQFVSKVG MNFNTLEDAT KFYKDYLKTA  60
AFSTRVRSTN KKGNEIKNKL ITCNRKGKWK SKISPTEKTN PSAGLNYPVR IYIYILKDIG  120
VWIIFKVVLH HSHPCCANQT EMLKQHRELN ISVCHTI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.U4091
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020997160.13e-81protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A444XP633e-84A0A444XP63_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G76320.26e-09FAR1-related sequence 4