PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.U1K2F | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | G2-like | ||||||||
Protein Properties | Length: 246aa MW: 28034.2 Da PI: 10.5028 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 84.7 | 9.3e-27 | 191 | 238 | 4 | 51 |
G2-like 4 lrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51 +rWtp+LH rFv+av++LGG+e+AtPk +l+lm++kgL ++hvkSHLQ Araip.U1K2F 191 MRWTPNLHLRFVHAVQRLGGQERATPKLVLQLMNIKGLIITHVKSHLQ 238 89********************************************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
TIGRFAMs | TIGR01557 | 3.3E-18 | 191 | 238 | IPR006447 | Myb domain, plants |
SuperFamily | SSF46689 | 1.79E-10 | 191 | 239 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 1.3E-6 | 191 | 238 | IPR001005 | SANT/Myb domain |
Gene3D | G3DSA:1.10.10.60 | 5.4E-22 | 191 | 238 | IPR009057 | Homeodomain-like |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 246 aa Download sequence Send to blast |
MTVRELGLSD TVLDSLAQCF SRNTSEIKRY ESPSNVLYML DMKLLVMKTM LLGIPRMEIP 60 KIFLKVKSLF WKRILKQLLT PLTIFFVDAV LFSIANYMDV PRILSSSLRS NLWNPLDTEH 120 EPCGLNCFKL VLKLGRFFNA TSSAQADVEE KCSGSSLSRK KSFAKRYLGE TGQHMLGSNV 180 LPVPSLMLTF MRWTPNLHLR FVHAVQRLGG QERATPKLVL QLMNIKGLII THVKSHLQEQ 240 EGRGHK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 8e-16 | 191 | 239 | 5 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 8e-16 | 191 | 239 | 5 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 1e-15 | 191 | 239 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 1e-15 | 191 | 239 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 1e-15 | 191 | 239 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 1e-15 | 191 | 239 | 4 | 52 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 8e-16 | 191 | 239 | 5 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 8e-16 | 191 | 239 | 5 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 8e-16 | 191 | 239 | 5 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 8e-16 | 191 | 239 | 5 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 8e-16 | 191 | 239 | 5 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 8e-16 | 191 | 239 | 5 | 53 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.U1K2F |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A444XS07 | 1e-103 | A0A444XS07_ARAHY; Uncharacterized protein |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G38300.1 | 2e-22 | G2-like family protein |