PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.TFA7R

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

TCP

Protein Properties

Length: 269aa MW: 30097 Da PI: 8.5698

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.TFA7R	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	40.8	8.3e-13	75	170	8	89
TCP 8 hskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec........eaesssssasnsssg........k 89 ++ Tk++ RdR + + +c F+ ++LG+ ++sk ++WLl++ak++i++l+ ++ ++++++ + ++s+ +++++ss+ + Araip.TFA7R 75 QKQLETKKNERDRFIII-RSCSWPGFKNNKKLGLNQPSKVVDWLLNAAKHEIDDLPPLPIPPSNFTlacypslpT-NKSNHNKEQDSSNntsahvlpN 170 67777888888887755.4688888*********************************99999776555555432.2222222222222233334440 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF03634	4.9E-6	99	179	IPR005333	Transcription factor, TCP

Sequence ? help Back to Top
Protein Sequence Length: 269 aa Download sequence Send to blast
MTLLSSIKRN IASIEKKRED NYIKNESMQQ ETSLYLIAIP IHKNNCAQPL FEMCNKWSLH 60 WYYGVGTSCK SIQSQKQLET KKNERDRFII IRSCSWPGFK NNKKLGLNQP SKVVDWLLNA 120 AKHEIDDLPP LPIPPSNFTL ACYPSLPTNK SNHNKEQDSS NNTSAHVLPN SFLLPTTINH 180 NHHPPSFLGL LNTMPSSIGA SQILCCSPSP LPRAAAAATT ATTQSYFSPS SFSHYNNNNV 240 AAAMEIMDPR QINHHHHGDE SSSESCKIT

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.TFA7R

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_016178884.1	6e-88	transcription factor TCP13
Refseq	XP_020969320.1	6e-88	transcription factor TCP13
Refseq	XP_020969321.1	6e-88	transcription factor TCP13
Refseq	XP_025685624.1	6e-88	transcription factor TCP13
TrEMBL	A0A445B2R2	4e-67	A0A445B2R2_ARAHY; Uncharacterized protein

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF28689	2	2