PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.SZ63C
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family AP2
Protein Properties Length: 467aa    MW: 53667.5 Da    PI: 9.5666
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.SZ63CgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.16.9e-11134190155
          AP2   1 sgykGVrwdkkrgrWvAeIrd.pseng.krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  s y+G+++++++gr++A+++d   +n+ ++k+ + g ++t++ Aa+ ++ a++k++g
  Araip.SZ63C 134 SIYRGITRHRWTGRFEAHLWDkNFWNNiQSKKGRQGAYDTEKAAARSYDLAALKYWG 190
                  57*******************7777**98888888*****99*************98 PP
2AP253.46.4e-17272323155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  s+y+GV +++ +grW+A+I  +  ng +k+ +lg++ t eeAa+a+++a+ k++g
  Araip.SZ63C 272 SKYRGVARHHHNGRWEARIGRV--NG-NKYLYLGTYNTQEEAAAAYDKAAIKYRG 323
                  89****99**********9986..44.6*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000182.46E-15134197No hitNo description
PfamPF008473.2E-8134190IPR001471AP2/ERF domain
SuperFamilySSF541712.35E-13134199IPR016177DNA-binding domain
PROSITE profilePS5103217.78135198IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.1E-10135198IPR001471AP2/ERF domain
SMARTSM003805.0E-17135204IPR001471AP2/ERF domain
CDDcd000181.50E-15272333No hitNo description
PfamPF008472.5E-12272323IPR001471AP2/ERF domain
SuperFamilySSF541716.21E-18272333IPR016177DNA-binding domain
Gene3DG3DSA:3.30.730.109.7E-19273331IPR001471AP2/ERF domain
PROSITE profilePS5103218.281273331IPR001471AP2/ERF domain
SMARTSM003801.2E-26273337IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MVNRTLSVMQ NTLLIYRSII HILSFRVKNR CIKMVTILSN NNWILWNKFM IVTPEIQEWK  60
PLTLLKEYRG GGCEMKRSSN SSSSSSSTSI RAGFELEINN NGKYPKSKNS INDVKLPLNK  120
VFKRTNSCGN KRSSIYRGIT RHRWTGRFEA HLWDKNFWNN IQSKKGRQGA YDTEKAAARS  180
YDLAALKYWG SNTILNFSIE TYAKEIEEMK DISQTEYLAS LRRRSSGFSR GVSKYRGMET  240
YAKEIEEMKD ISQTEYLASL RRRSSGFSRG VSKYRGVARH HHNGRWEARI GRVNGNKYLY  300
LGTYNTQEEA AAAYDKAAIK YRGINAVTNF DISNYIDKIK KNEPSMKKAQ TQITPISTEF  360
EEAEVVEQEA PSTVVAHPAN LENMQKEREQ PNTDINGMLS RDLRWSFMDA ELSEFNVNDI  420
FQGKGSGLED DINFLCMADP DENSFNLNTI FDGLEKCDGD MHVHANY
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.SZ63C
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016200743.10.0ethylene-responsive transcription factor WRI1-like isoform X1
RefseqXP_025654485.10.0ethylene-responsive transcription factor WRI1 isoform X1
TrEMBLA0A444Z6330.0A0A444Z633_ARAHY; Uncharacterized protein
STRINGXP_007133537.11e-104(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF98593241
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54320.32e-72AP2 family protein