PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.PT3JP | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | FAR1 | ||||||||
Protein Properties | Length: 225aa MW: 26297.5 Da PI: 9.5609 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 35.6 | 3.1e-11 | 148 | 225 | 2 | 79 |
FAR1 2 fYneYAkevGFsvrkskskks..krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevt 79 +Y +YA ++GF v+++++ + + ++ ++++ ++C++ g+ +++ k+ +r++++ t+Ck ++ + ++k g+w+++ Araip.PT3JP 148 YYYRYAARTGFVVKIRTTGWEtrNGQRVVINQALYCNRDGYCTSRVKA---PKRRKTVASTNCKVHFYLALDKmIGQWRIS 225 8************99887666224455799***************999...778888999***********9999***995 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03101 | 8.6E-9 | 148 | 225 | IPR004330 | FAR1 DNA binding domain |
Sequence ? help Back to Top |
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Protein Sequence Length: 225 aa Download sequence Send to blast |
MLIAKCLFFP SPKATVSDIH IRAAIDVSNP RKIYWVRYIY GFLIEGVLRF QDVGKKTVDG 60 WMFALLIIYL HANKNGDLGR YNGREPWIKD WSLADLKKMD EEESTSHLSF ICFFLLFFFQ 120 VINQVIGDEE LEHKEGMCFS ILEDARAYYY RYAARTGFVV KIRTTGWETR NGQRVVINQA 180 LYCNRDGYCT SRVKAPKRRK TVASTNCKVH FYLALDKMIG QWRIS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 193 | 199 | KAPKRRK |
2 | 195 | 201 | PKRRKTV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.PT3JP |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |