PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.PI5NS
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family MYB_related
Protein Properties Length: 542aa    MW: 60808.1 Da    PI: 6.4616
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.PI5NSgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding21.74.6e-07480531447
                      S-HHHHHHHHHHHHHTTTT....-HHHHHHHHT....TTS-HHHHHHHHHHH CS
  Myb_DNA-binding   4 WTteEdellvdavkqlGgg....tWktIartmg....kgRtlkqcksrwqky 47 
                      WT+eE+++l ++v ++ ++     W++I +       k+R++ ++k++w++ 
      Araip.PI5NS 480 WTAEEEKILQEGVLRFSKEnqriPWNRILEFGHhvfdKTRSPIDLKDKWRNI 531
                      *****************99**********988899***************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF579038.86E-7119174IPR011011Zinc finger, FYVE/PHD-type
Gene3DG3DSA:3.30.40.101.7E-7120170IPR013083Zinc finger, RING/FYVE/PHD-type
PROSITE patternPS013590123166IPR019786Zinc finger, PHD-type, conserved site
Gene3DG3DSA:1.10.10.602.2E-6479538IPR009057Homeodomain-like
SuperFamilySSF466891.79E-8480536IPR009057Homeodomain-like
CDDcd116609.32E-11480533No hitNo description
PROSITE profilePS500906.47480532IPR017877Myb-like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009751Biological Processresponse to salicylic acid
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 542 aa     Download sequence    Send to blast
MRIKTRGGRR RLSCSADPPS PITKQDEYVA AELEISHGGG GDDAKDAPMV DCINQHYNEN  60
HLDVLNHEQD KNCATEFETS HGGGDDDNVK DVPTVECIDQ HYNKNPLDIL DHEDIDFLDK  120
SICLCCNKRG GVLVCSGSGC PVGLHPKCIK SEPKFDDLGK FYCPYCWYSR NVNMNPELKE  180
RIFSAKNALL DLSDKDVVMN DRLVKTKSAD KRKEPDDGGG IPLGSDGRQG TDEVGAQLLQ  240
PKVGLPIKLQ KDASVQCDIA LEDQAYSDGD FRSCGEEVMP VDINLVEGSL DQDKFGRPGK  300
VETDETKSLE LKESFKTGDS RLNKEDVHER IINGREEGGH LDALHLGKHI EGHSKDIAFA  360
QGTQESSVKS GDKGRKTGKE KMPLKENEES AIGSSVNETN NSDSDAISGR SCCSKRKIQK  420
TAYPQYVYKK PLLQGNNFKE EKGSDINEEV TSSRFRRRSQ SSQKQEMRKI PLARRNMLIW  480
TAEEEKILQE GVLRFSKENQ RIPWNRILEF GHHVFDKTRS PIDLKDKWRN IKKGQNKKQM  540
NG
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.PI5NS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016162492.10.0uncharacterized protein LOC107605217
TrEMBLA0A444YU590.0A0A444YU59_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF120552022