PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.P7G4I | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bHLH | ||||||||
Protein Properties | Length: 552aa MW: 62022.2 Da PI: 9.0639 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38 | 2.9e-12 | 342 | 386 | 5 | 54 |
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h ++ErrRR+++N+ f+ Lr llP+ +K +Ka+iL+ A e ++sL Araip.P7G4I 342 HMIAERRRREKLNDNFQALRALLPPG-----TKKDKASILTTAKETLSSL 386 889*********************97.....8***********9999887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
CDD | cd00083 | 1.36E-10 | 335 | 391 | No hit | No description |
SuperFamily | SSF47459 | 1.13E-14 | 337 | 408 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 14.246 | 337 | 386 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 3.3E-14 | 341 | 404 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Pfam | PF00010 | 1.5E-9 | 342 | 386 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.2E-10 | 343 | 392 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 552 aa Download sequence Send to blast |
MMEGVFFLPE AARTGYLRSI VQSVGCAYIC LWSFDPTSSP NNRLFFLDGF YNNVRNNQQA 60 SSSLGSVAQQ LFNQFRTLRF DANDDRIPGL AFRNNRPYLE VQQPELLRLA WTQIQKQFFQ 120 EARIKTAVFM GCNKGEIELG FLNMSQAEIQ TALSSLFQED FSSGRQIMDH QNNPPSSSSS 180 SLRSLSTTAG SPEYSSLLFN IPPAGTLGTG GVTTGGATAG AIVPNTMSPL SSNTQSALLT 240 NYVFPSHHQE IENETLMRVF LNAISPQQHQ NLPYNITVVH PEGSAFKRYR TEPEPGPERG 300 PESLRSRQSL MKRSLAFFRS INAMRIRERI QATRPSSTQL HHMIAERRRR EKLNDNFQAL 360 RALLPPGTKK DKASILTTAK ETLSSLMAEI EKLRIRNHEL ESRLPESSKE SSATDQEISK 420 TMLLVPPNER FHVQISDVPQ SSSSSSSEER RVDLHVALRG QISQIDAVIR LLEFLKLAQN 480 VSLVTMTTNT NNVGQGNNNY INQLTFRLRI LEVCYLSFIK MHVLIGSEWD VSAFQEAVKR 540 VVGDLAQFQV DH |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 345 | 350 | ERRRRE |
2 | 346 | 351 | RRRREK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.P7G4I |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020974464.1 | 0.0 | putative transcription factor bHLH041 | ||||
TrEMBL | A0A445DX53 | 0.0 | A0A445DX53_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA15G18580.2 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF4150 | 33 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G56960.1 | 3e-58 | bHLH family protein |