PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.ML4Q2 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bZIP | ||||||||
Protein Properties | Length: 168aa MW: 19357.7 Da PI: 10.6668 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 29.4 | 1.8e-09 | 66 | 112 | 5 | 51 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkelee 51 ++ rrk++NRe+ArrsR RK+ +e+L++ k+ eN++L ++l+ Araip.ML4Q2 66 RKRRRKISNRESARRSRMRKQRHLENLRNQLKASRVENRELNNRLQL 112 6789**********************************999977764 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 1.2E-11 | 62 | 126 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.1E-7 | 63 | 113 | No hit | No description |
Pfam | PF07716 | 1.7E-4 | 64 | 113 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.094 | 64 | 113 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.21E-9 | 66 | 116 | No hit | No description |
CDD | cd14702 | 4.25E-15 | 67 | 118 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 69 | 84 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 168 aa Download sequence Send to blast |
MLSAISASDA LIGNPFASSA FDGGLPSWDC TDFIFAAINT SSSGSDDSNE NNAKEKPGSE 60 AVMDERKRRR KISNRESARR SRMRKQRHLE NLRNQLKASR VENRELNNRL QLMVHHFNCV 120 RTENDWLRSE RTLLRQKLSY MTQILLFQQL RQQPFSSSAW PCNNVTPQ |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 65 | 69 | RKRRR |
2 | 78 | 85 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.ML4Q2 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016201597.1 | 1e-122 | basic leucine zipper 43 | ||||
Refseq | XP_025652187.1 | 1e-122 | basic leucine zipper 43 | ||||
TrEMBL | A0A444ZAQ8 | 1e-120 | A0A444ZAQ8_ARAHY; Uncharacterized protein | ||||
STRING | AES90754 | 7e-57 | (Medicago truncatula) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5435 | 32 | 54 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G22850.2 | 7e-24 | basic leucine-zipper 6 |