PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.L5CJ5 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | G2-like | ||||||||
Protein Properties | Length: 459aa MW: 50878.1 Da PI: 7.424 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 103.2 | 1.6e-32 | 306 | 361 | 1 | 56 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 k+r++W+peLH+rFv+a+++LGGs++AtPk+i+elm+v+gLt+++vkSHLQkYRl+ Araip.L5CJ5 306 KQRRCWSPELHRRFVNALQKLGGSQVATPKQIRELMQVDGLTNDEVKSHLQKYRLH 361 79****************************************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF46689 | 6.4E-18 | 303 | 364 | IPR009057 | Homeodomain-like |
PROSITE profile | PS51294 | 14.461 | 303 | 363 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 6.1E-29 | 304 | 364 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 2.1E-27 | 306 | 361 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.9E-8 | 308 | 359 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 459 aa Download sequence Send to blast |
MGSVPAELSL DIRPPTPPPP PPPSTPSFIP KTITDFLSAL STTGITASEK QSRINDFLSH 60 LEDEYNKIHA FKRELPLSML LLSDEELEKC SEGERKSEPV LEVFIPLKRE FDHSEDDEEH 120 NNNNNNDNNN NNNNIRQEKE CRDKMSWMSS VQLWNASSST TLNNNNNNNA FDNNHKHHHQ 180 NHHHKFGTKK NQEFVVENPF QSHSNVRNNG GRGFMPFTSY TSCSVPVTTV ALSATKEEKE 240 DIGAINRLPL LTPAAAGGGV KTLREGSGSS GSRTSSNNRP VSTSSPPAAA HRTAMMPLQP 300 QQTARKQRRC WSPELHRRFV NALQKLGGSQ VATPKQIREL MQVDGLTNDE VKSHLQKYRL 360 HTRRVPSGSG NHSHNHNQSV VVLGGLWMSQ GQDQCNDSSK GSSSGSGSPQ SPLHLATRSR 420 GGMSPAEADD SMEDDEDAKS ESYSWKSHTH HKQVKVVDV |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 2e-13 | 306 | 359 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 2e-13 | 306 | 359 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 2e-13 | 306 | 359 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 2e-13 | 306 | 359 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 2e-13 | 306 | 359 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 2e-13 | 306 | 359 | 1 | 54 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 2e-13 | 306 | 359 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 2e-13 | 306 | 359 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 2e-13 | 306 | 359 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 2e-13 | 306 | 359 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 2e-13 | 306 | 359 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 2e-13 | 306 | 359 | 2 | 55 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.L5CJ5 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016180977.1 | 0.0 | transcription factor HRS1 | ||||
Refseq | XP_025682064.1 | 0.0 | transcription factor HRS1 | ||||
TrEMBL | A0A444X3B5 | 0.0 | A0A444X3B5_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA02G15320.1 | 1e-125 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1208 | 34 | 107 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03500.1 | 2e-36 | G2-like family protein |