PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.L222I | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NAC | ||||||||
Protein Properties | Length: 423aa MW: 47323.4 Da PI: 6.9395 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 168.3 | 2.5e-52 | 28 | 155 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97 + pGfrFhPtdeelv +yLk+k+++ +l++ e ik++diyk++PwdLpk + ++ekewyf+++rd+ky+++ r+nr+t +g+Wkatg+d++++s+ ++ Araip.L222I 28 MLPGFRFHPTDEELVGFYLKRKIQQMPLSI-ELIKQLDIYKYDPWDLPKVAGTGEKEWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSeGS 124 579***************************.89***************9888999***************************************9566 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 + +glkk+Lvfykgra kg+ktdW+mhe+rl Araip.L222I 125 KCIGLKKSLVFYKGRAAKGVKTDWMMHEFRL 155 77***************************98 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 57.514 | 28 | 182 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.57E-58 | 28 | 182 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.9E-25 | 30 | 155 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009733 | Biological Process | response to auxin | ||||
GO:0045770 | Biological Process | positive regulation of asymmetric cell division | ||||
GO:0048103 | Biological Process | somatic stem cell division | ||||
GO:0048829 | Biological Process | root cap development | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 423 aa Download sequence Send to blast |
ACFFYISTSF NSLLFLEEME GEKLDEIMLP GFRFHPTDEE LVGFYLKRKI QQMPLSIELI 60 KQLDIYKYDP WDLPKVAGTG EKEWYFYCPR DRKYRNSARP NRVTGAGFWK ATGTDRPIYS 120 SEGSKCIGLK KSLVFYKGRA AKGVKTDWMM HEFRLPSLAD SSSDKTTIPP NDSWAICRIF 180 KKTNATAQRA LSHSWVSTLP ETPTTTTNDT DHIFHFCSSN MPTMMAKKTS FMTQFCTNYT 240 SDTQIQDVAS SYKPPFININ PLLYKHFDHH HHQLPPIISN GDLISNDCLI PSSTTTPLET 300 SSNSAKPTMD FSSLLLNMSS SVLGDFAGKT SSSSSSQEGT AATATTITSS FGGGMQEHYP 360 TIPLLRQMHQ GNNNNNIGIN NNNVSAGGEE QELEKVGSIV GFPFMNIGDA WKSNMLWDTS 420 CPL |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-54 | 30 | 189 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-54 | 30 | 189 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-54 | 30 | 189 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-54 | 30 | 189 | 19 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-54 | 30 | 189 | 22 | 174 | NAC domain-containing protein 19 |
3swm_B | 3e-54 | 30 | 189 | 22 | 174 | NAC domain-containing protein 19 |
3swm_C | 3e-54 | 30 | 189 | 22 | 174 | NAC domain-containing protein 19 |
3swm_D | 3e-54 | 30 | 189 | 22 | 174 | NAC domain-containing protein 19 |
3swp_A | 3e-54 | 30 | 189 | 22 | 174 | NAC domain-containing protein 19 |
3swp_B | 3e-54 | 30 | 189 | 22 | 174 | NAC domain-containing protein 19 |
3swp_C | 3e-54 | 30 | 189 | 22 | 174 | NAC domain-containing protein 19 |
3swp_D | 3e-54 | 30 | 189 | 22 | 174 | NAC domain-containing protein 19 |
4dul_A | 2e-54 | 30 | 189 | 19 | 171 | NAC domain-containing protein 19 |
4dul_B | 2e-54 | 30 | 189 | 19 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.L222I |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016193688.1 | 0.0 | putative NAC domain-containing protein 94 isoform X1 | ||||
Refseq | XP_025639069.1 | 0.0 | putative NAC domain-containing protein 94 isoform X1 | ||||
TrEMBL | A0A444ZUI3 | 0.0 | A0A444ZUI3_ARAHY; Uncharacterized protein | ||||
STRING | XP_007158658.1 | 1e-156 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2013 | 34 | 90 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G26870.1 | 1e-102 | NAC family protein |