PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.JX56Z | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 212aa MW: 22637.1 Da PI: 9.4421 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 81.8 | 7e-26 | 103 | 153 | 2 | 51 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEE CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveit 51 +D ++WrKYGqK++kgs++pr+YYrC+s+ gCp++k+vers++dp+++ i Araip.JX56Z 103 SDLWAWRKYGQKPIKGSPYPRGYYRCSSTkGCPTRKQVERSRTDPNMFRIR 153 699************************998*****************9986 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 5.3E-25 | 95 | 152 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 25.878 | 97 | 150 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 4.05E-21 | 99 | 154 | IPR003657 | WRKY domain |
SMART | SM00774 | 5.3E-27 | 102 | 161 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.6E-20 | 104 | 152 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 212 aa Download sequence Send to blast |
MPSLPSLSSP DLSSSSSSSV CTCCWLVFSS LARNKSPIVN PCHRVAPPVS TSCVVLPPAS 60 GSTADLLSPL SGPDPRKSQV NKLICITTAA SPSSRQGEEV VPSDLWAWRK YGQKPIKGSP 120 YPRGYYRCSS TKGCPTRKQV ERSRTDPNMF RIRSLGAACR IAVSASIVIV SSGLLLARLL 180 FSGAHPFLWC KGEELPPDIA AGMNFVEGPS EK |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 2e-16 | 77 | 155 | 2 | 71 | Disease resistance protein RRS1 |
5w3x_D | 2e-16 | 77 | 155 | 2 | 71 | Disease resistance protein RRS1 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.JX56Z |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015957346.1 | 2e-40 | probable WRKY transcription factor 14 | ||||
Refseq | XP_025691298.1 | 2e-40 | probable WRKY transcription factor 14 | ||||
TrEMBL | A0A444ZT96 | 6e-39 | A0A444ZT96_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2770 | 34 | 75 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G34830.1 | 3e-36 | WRKY DNA-binding protein 35 |