PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.J80SY
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Nin-like
Protein Properties Length: 363aa    MW: 40914 Da    PI: 6.1286
Description Nin-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.J80SYgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1RWP-RK72.36.2e-23267314451
       RWP-RK   4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiks 51 
                  +++l+d + yF+ pi++A++++++c+Tv+K+iCR+ G++RWP+Rkiks
  Araip.J80SY 267 KMKLDDFAPYFHFPIEEASRQMNICPTVVKKICRKEGLSRWPYRKIKS 314
                  78999******************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5151917.154248335IPR003035RWP-RK domain
PfamPF020422.3E-20268314IPR003035RWP-RK domain
Sequence ? help Back to Top
Protein Sequence    Length: 363 aa     Download sequence    Send to blast
MDNPCFVVPY HDPYDTPPLS PSFFNISNPT LLDLTNVASG NESSHSQQKN NIIQDGNLQP  60
TFDPMIQDSN FVGGTGGNNF ESIPLLQVHS EEGLSHDFNN NVNTITLSHW PLPPVPFSCS  120
CCSVLREIVH TNGFNFKKVE IHGRPGLISH AIQHPSVNGD YTSTSNLQYQ MIDFCRRGID  180
DVKNFLVEYC RVQSAAGYFM LQDPLSAYYE ALCTGLEWVE EFSDDTDDLN ASNSDDENEQ  240
VADNGVGASG KAPRRLSLSE QRDRAGKMKL DDFAPYFHFP IEEASRQMNI CPTVVKKICR  300
KEGLSRWPYR KIKSTVRQIS QLKRTMESKD VRSKARIQAE IYRLHLKLRE ICAGRYPSGL  360
VIP
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.J80SY
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016179476.10.0uncharacterized protein LOC107622064
RefseqXP_025681555.10.0uncharacterized protein LOC112783034
TrEMBLA0A444X6E30.0A0A444X6E3_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF74782846
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24020.13e-14NIN like protein 7