PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.I6WBX
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 342aa    MW: 38924.1 Da    PI: 7.5586
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.I6WBXgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix42.71.5e-13411231087
     trihelix  10 LiearremeerlrrgklkkplWeevskkm.....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                  L++a  ++  +l+rg+l++++W++v++ +     + ++ +r+ +qCk++++ ++k+yk +k++    + ++ss++p+f++l+a
  Araip.I6WBX  41 LVDAWGRRYLELNRGNLRQKDWQDVADTVnalhgHTKKTHRTDVQCKNRIDTIKKKYKVEKARVTASNGTVSSSWPFFEKLDA 123
                  6666667777899*******************99999***************************999999**********985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138372.1E-2138124No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 342 aa     Download sequence    Send to blast
MNKTKEKYET EFFTNLWLSR HLTATQVGNY NYALPSASAT LVDAWGRRYL ELNRGNLRQK  60
DWQDVADTVN ALHGHTKKTH RTDVQCKNRI DTIKKKYKVE KARVTASNGT VSSSWPFFEK  120
LDALIGPNFN AKKNSSSPSP SPPVALPLLP YRKASVPAVS PVTAVPPAAV ALPQKRSAAA  180
AMDDGYFRRN YSAMAAAAAA AEADEEYEDE EEEEEEDEEE EEEDGRGSEV EEGERDREGM  240
RRLAKAIERF GEVYERVEAQ KLKQMVDLEK QRMQFAKDLE VQRMQMFMDT QVQLERIKRG  300
KRSGSNGKMK IWKPFLFPPL GIVIDGFSPY FPFLKLDLIK CK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.I6WBX
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016181520.10.0trihelix transcription factor ASIL2
RefseqXP_025621864.10.0trihelix transcription factor ASIL2
RefseqXP_025684331.10.0trihelix transcription factor ASIL2
TrEMBLA0A444WYR00.0A0A444WYR0_ARAHY; Uncharacterized protein
STRINGGLYMA13G30280.11e-142(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF18873379
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58630.17e-32sequence-specific DNA binding transcription factors