PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.HGA1J
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 182aa    MW: 20807.1 Da    PI: 7.3847
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.HGA1JgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR126.81.7e-085199151
         FAR1  1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkkteke 51
                 kfY++YAk +GFs+r+++++++   +ei+++  +Cs+e k +++ + tek+
  Araip.HGA1J 51 KFYRNYAKAAGFSTRVRSTNRK--GNEIKNQLITCSREEKWKSKISPTEKT 99
                 6****************98887..8889**********9999987773332 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.9E-65198IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 182 aa     Download sequence    Send to blast
MDDSTSDCQL NPGEVDYEFE SNEVPEPLSV VDDQFVPKVG MTFTTLENAG KFYRNYAKAA  60
GFSTRVRSTN RKGNEIKNQL ITCSREEKWK SKISPTEKTN PTAGMRSTQR SESMHSFFNK  120
FITRNSSLIQ FVKQYDNCLG SREQAERESD AADFHTVIPC VNKSSIEAQF QDAYTHQKFR  180
KV
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.HGA1J
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankHQ6371781e-105HQ637178.1 Arachis hypogaea clone AHF-205D04 NBS-LRR gene cluster, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020992539.14e-63protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997160.12e-63protein FAR1-RELATED SEQUENCE 5-like
RefseqXP_020997362.16e-63protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445BXA61e-104A0A445BXA6_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2114477
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.13e-10FAR1 family protein