PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Araip.HE4VX

Organism

Arachis ipaensis

Taxonomic ID

130454

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis

Family

bZIP

Protein Properties

Length: 448aa MW: 50142.5 Da PI: 8.3356

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Araip.HE4VX	genome	NCGR_PGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.2	7.4e-08	185	208	2	25
XXXCHHHCHHHHHHHHHHHHHHHH CS bZIP_1 2 kelkrerrkqkNReAArrsRqRKk 25 +++k rr+++NReAAr+sR+RKk Araip.HE4VX 185 AKVKTLRRLAQNREAARKSRLRKK 208 678999*****************8 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.3E-4	186	257	No hit	No description
PROSITE pattern	PS00036	0	191	206	IPR004827	Basic-leucine zipper domain
Pfam	PF14144	7.1E-22	258	311	IPR025422	Transcription factor TGA like domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 448 aa Download sequence Send to blast
MASQRIGGDT GLSESLITSH HHASTHGVLH GINTPSSILM NEEGAFDFGE LEEAIVLQGI 60 KTRNDEEAKA SSLFITGRPA ATLEMFPSWP IRFHQTSRGG CKSGGGDENT DSGSGSGVNT 120 NTLSSKLETE PHHNHFQSQD SPISSHQQQQ DQEVQLATSD ASRKGPSPQQ KKKGASSTSE 180 KAVDAKVKTL RRLAQNREAA RKSRLRKKVG STWHHLFIFI SKKCKTHCIG LEQAYVQQLE 240 CSRLKLTQLE KEVERARSQS YMSHYDDLFR LKAEGAKWDV FHIMNGTWTS PAERCFLWMG 300 GFRPSDLVGL LIHHLEPLAE QQIIAMYGLR HSSQQAEDAL SQGLEQLHHS LLHTISLPQM 360 LAAMAKLSNL EAFLLQADHL RQQTLHQFCR FLTIRQAARC FLVIGDYYAR LRALSSLWAS 420 RTLINHHDNS TMDLQTLQPS PQNHLSNF

Sequence ? help Back to Top

Protein Sequence Length: 448 aa Download sequence Send to blast

MASQRIGGDT GLSESLITSH HHASTHGVLH GINTPSSILM NEEGAFDFGE LEEAIVLQGI  60
KTRNDEEAKA SSLFITGRPA ATLEMFPSWP IRFHQTSRGG CKSGGGDENT DSGSGSGVNT  120
NTLSSKLETE PHHNHFQSQD SPISSHQQQQ DQEVQLATSD ASRKGPSPQQ KKKGASSTSE  180
KAVDAKVKTL RRLAQNREAA RKSRLRKKVG STWHHLFIFI SKKCKTHCIG LEQAYVQQLE  240
CSRLKLTQLE KEVERARSQS YMSHYDDLFR LKAEGAKWDV FHIMNGTWTS PAERCFLWMG  300
GFRPSDLVGL LIHHLEPLAE QQIIAMYGLR HSSQQAEDAL SQGLEQLHHS LLHTISLPQM  360
LAAMAKLSNL EAFLLQADHL RQQTLHQFCR FLTIRQAARC FLVIGDYYAR LRALSSLWAS  420
RTLINHHDNS TMDLQTLQPS PQNHLSNF

Functional Description ? help Back to Top
Source	Description
UniProt	Together with TGA10, basic leucine-zipper transcription factor required for anther development, probably via the activation of SPL expression in anthers and via the regulation of genes with functions in early and middle tapetal development (PubMed:20805327). Required for signaling responses to pathogen-associated molecular patterns (PAMPs) such as flg22 that involves chloroplastic reactive oxygen species (ROS) production and subsequent expression of H(2)O(2)-responsive genes (PubMed:27717447). {ECO:0000269\|PubMed:20805327, ECO:0000269\|PubMed:27717447}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Araip.HE4VX

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by flg22 in leaves. {ECO:0000269\|PubMed:27717447}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025641588.1	0.0	transcription factor TGA9 isoform X1
Swissprot	Q93XM6	1e-110	TGA9_ARATH; Transcription factor TGA9
TrEMBL	A0A445E505	0.0	A0A445E505_ARAHY; Uncharacterized protein
STRING	GLYMA12G09430.5	1e-150	(Glycine max)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08320.3	1e-112	bZIP family protein

Publications ? help Back to Top
Gutsche N,Zachgo S The N-Terminus of the Floral Arabidopsis TGA Transcription Factor PERIANTHIA Mediates Redox-Sensitive DNA-Binding. PLoS ONE, 2016. 11(4): p. e0153810 [PMID:27128442] Noshi M,Mori D,Tanabe N,Maruta T,Shigeoka S Arabidopsis clade IV TGA transcription factors, TGA10 and TGA9, are involved in ROS-mediated responses to bacterial PAMP flg22. Plant Sci., 2016. 252: p. 12-21 [PMID:27717447] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]