PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.H57JT | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | TCP | ||||||||
Protein Properties | Length: 127aa MW: 14488.7 Da PI: 10.0584 | ||||||||
Description | TCP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | TCP | 29.9 | 1.9e-09 | 1 | 27 | 5 | 31 |
TCP 5 kdrhskihTkvggRdRRvRlsaecaar 31 kdrhskih + g+RdRRvRls+e+ ++ Araip.H57JT 1 KDRHSKIHISHGLRDRRVRLSSEIVRK 27 8**********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF03634 | 3.1E-8 | 1 | 27 | IPR005333 | Transcription factor, TCP |
Sequence ? help Back to Top |
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Protein Sequence Length: 127 aa Download sequence Send to blast |
KDRHSKIHIS HGLRDRRVRL SSEIVRKTCW SSTSPATRSN GFSPVKEEAH QLAQIFETVG 60 AFKDSTLYHF SMFHASHHIQ PVPAIKEEVE GIGLLRAIEL ILLFGLIRFF LVRSFDVKGY 120 VTGVWES |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.H57JT |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |