PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.FL5PZ
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family CAMTA
Protein Properties Length: 994aa    MW: 110105 Da    PI: 6.1125
Description CAMTA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.FL5PZgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CG-1181.41.1e-56151294117
         CG-1   4 e.kkrwlkneeiaaiLenfekheltlelktrpksgsliLynrkkvryfrkDGyswkkkkdgktvrEdhekLKvggvevlycyYahseenptfqrrcyw 100
                  e ++rwlk+ e++ iL+n++k+++t+e++++p+sgsl+L+nr+++r+fr+DG++w+kkkdg+tv E+he+LKvg+ve+l+cyYah+e+nptfqrr+yw
  Araip.FL5PZ  15 EaQSRWLKPVEVMYILQNHDKYQFTQEPPQQPTSGSLFLFNRRVLRFFRRDGHNWRKKKDGRTVGEAHERLKVGTVEALNCYYAHGEQNPTFQRRSYW 112
                  5599********************************************************************************************** PP

         CG-1 101 lLeeelekivlvhylev 117
                  +L+ ++e+ivlvhy+e+
  Araip.FL5PZ 113 MLDPAYEHIVLVHYRET 129
                  ***************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5143783.4919135IPR005559CG-1 DNA-binding domain
SMARTSM010764.4E-7712130IPR005559CG-1 DNA-binding domain
PfamPF038591.8E-4815128IPR005559CG-1 DNA-binding domain
Gene3DG3DSA:2.60.40.108.7E-9427516IPR013783Immunoglobulin-like fold
CDDcd001028.51E-5428512No hitNo description
SuperFamilySSF812962.1E-17429512IPR014756Immunoglobulin E-set
PfamPF018331.7E-8429511IPR002909IPT domain
Gene3DG3DSA:1.25.40.203.2E-16622719IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5029715.247624728IPR020683Ankyrin repeat-containing domain
SuperFamilySSF484032.02E-16625719IPR020683Ankyrin repeat-containing domain
CDDcd002042.74E-13629716No hitNo description
PfamPF127968.6E-8641719IPR020683Ankyrin repeat-containing domain
PROSITE profilePS5008810.339657689IPR002110Ankyrin repeat
SMARTSM002480.027657686IPR002110Ankyrin repeat
SMARTSM00248940696725IPR002110Ankyrin repeat
SMARTSM00015110774796IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500967.584775804IPR000048IQ motif, EF-hand binding site
SuperFamilySSF525403.45E-8823878IPR027417P-loop containing nucleoside triphosphate hydrolase
SMARTSM000150.45831853IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500968.444832861IPR000048IQ motif, EF-hand binding site
PfamPF006120.025834852IPR000048IQ motif, EF-hand binding site
SMARTSM000152.7E-5854876IPR000048IQ motif, EF-hand binding site
PROSITE profilePS500969.212855880IPR000048IQ motif, EF-hand binding site
PfamPF006123.0E-5857876IPR000048IQ motif, EF-hand binding site
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0005829Cellular Componentcytosol
GO:0003677Molecular FunctionDNA binding
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 994 aa     Download sequence    Send to blast
MATGDDYNID DLFREAQSRW LKPVEVMYIL QNHDKYQFTQ EPPQQPTSGS LFLFNRRVLR  60
FFRRDGHNWR KKKDGRTVGE AHERLKVGTV EALNCYYAHG EQNPTFQRRS YWMLDPAYEH  120
IVLVHYRETS EGRSSSGPGT QLSPSSSSAF GQSPSSYSAQ TPLSTSVLGD PSEPNQSYSS  180
SGTGEVTSDV FIMNDGMSHL DGTYADSGTS TEVEVTRALL RRLEEQLSLN EDSIKEIASF  240
YSEKEITGDS NAQQNQGLTC KQEESAAFSR PDDYGLIFYG HNGTQDEGDK SYELMDHTYR  300
DGNEKDIWTE VLESCKSSST ARLPQKNIYM PAGEYLKQEN SPSLSRKEPI ANQDDGHWLN  360
FNNSNNAENS VFSLPEGDSG VKYPPYSSVL GAQKANSEYY ATLFAQSQIG PSLDADSSLT  420
VSQKQKFSIK AVSPEWGYTT ETTKIIIVGS FLCHPSDSAW ACMFGDVEVP IEIIQDGVIS  480
CEAPSRLSGK VNLCITSGNR QSCSEVREFE YRNKTSICTY CNSSATEANR SPEELLLLVR  540
FAQMLLSGST TKNDDIESGT HLVKQKADDD SWSHIIEALL VGSGTSSGMV DWLLEELLKD  600
KLQLWLSCRS QEKDEVTGCC LSKKEQGIIH MVAGLGFEWA LHPILSCGVN INFRDISGWT  660
ALHWAARFGR EKMVASLIAC GASAGAVTDP SAQDPKGKTA ASIAASSGHK GLAGYLSERA  720
LTSHLSSLTM QETELSKSSA QLEADLAVCS VSKENLAAGE DQAPLKHTLA AVRNATQAAA  780
RIQSAFRSHS FRKRRAREAA AATAGGINAG SIGNIPELSA LSKLAFRNSR DHNSAALSIQ  840
KKFRGWKGRK DFLELRQKVV KIQAHVRGYQ VRKHYKVIWA VGILDKVVLR WRRKGAGLRG  900
FRQEMETSAL DESEDEDILK PYRKQMVDAE IKEAVSRVLS MVDSPDARQQ YHRMLEKYRQ  960
AKAELAGTSE EASLSTSIAD VFSMEDDMYQ FPQG
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to the DNA consensus sequence 5'-[ACG]CGCG[GTC]-3' (By similarity). Regulates transcriptional activity in response to calcium signals (Probable). Binds calmodulin in a calcium-dependent manner (By similarity). Involved together with CAMTA2 and CAMTA3 in the positive regulation of a general stress response (PubMed:25039701). {ECO:0000250|UniProtKB:Q8GSA7, ECO:0000269|PubMed:25039701, ECO:0000305|PubMed:11925432}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.FL5PZ
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By heat shock, UVB, salt, wounding, ethylene, methyl jasmonate, abscisic acid, H(2)O(2) and salicylic acid (PubMed:12218065). Induced by cold stress (PubMed:28351986). {ECO:0000269|PubMed:12218065, ECO:0000269|PubMed:28351986}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016191078.10.0calmodulin-binding transcription activator 4 isoform X4
RefseqXP_025640154.10.0calmodulin-binding transcription activator 4 isoform X4
SwissprotQ9FYG20.0CMTA4_ARATH; Calmodulin-binding transcription activator 4
TrEMBLA0A445DLE50.0A0A445DLE5_ARAHY; Uncharacterized protein
STRINGGLYMA05G28090.20.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45482950
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G67310.10.0Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains
Publications ? help Back to Top
  1. Benn G, et al.
    A key general stress response motif is regulated non-uniformly by CAMTA transcription factors.
    Plant J., 2014. 80(1): p. 82-92
    [PMID:25039701]
  2. Kidokoro S, et al.
    Different Cold-Signaling Pathways Function in the Responses to Rapid and Gradual Decreases in Temperature.
    Plant Cell, 2017. 29(4): p. 760-774
    [PMID:28351986]